RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 MED13Q9UHV7 2174 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 TRAV8-4A0A0B4J246 113 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 A0A0U1RRA0 63 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 MED13LQ71F56 2210 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 SPINK8P0C7L1 97 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 P0C879 139 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 OR13C6PQ8NH95 151 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 GTF3C1Q12789 2109 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 CCL19Q99731 98 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 VGLL1Q99990 258 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 COL6A6A6NMZ7 2263 aa11.79□□□□□ -0.52
RRP1B-201ENST00000340648 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 MINOS1Q5TGZ0 78 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 MINOS1-NBL1R4GNA1 71 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 ZFAND6Q6FIF0 208 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 A0A087WWL8 130 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 M0R1W7 72 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 GAGE2BQ13066 116 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 GTSF1Q8WW33 167 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 MALRD1Q5VYJ5 2156 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 OOSP1A8MZH6 123 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 ANKRD39Q53RE8 183 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 LINC00477Q96M19 166 aa11.78□□□□□ -0.52
RRP1B-201ENST00000340648 ITLN2Q8WWU7 325 aaPredicted RBP11.77□□□□□ -0.52
RRP1B-201ENST00000340648 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 ZNF491Q8N8L2 437 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 SCRT2Q9NQ03 307 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 H3BMG7 143 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 EFNA4P52798 201 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 ABCA4P78363 2273 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 C22orf46C9J442 243 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 TMEM238C9JI98 176 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 K7EM74 188 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 SAP30O75446 220 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 GP9P14770 177 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 C2orf66Q6UXQ4 117 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 DTX2Q86UW9 622 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 LINC01587Q99440 93 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 MOB4Q9Y3A3 225 aa11.77□□□□□ -0.53
RRP1B-201ENST00000340648 SLC25A16P16260 332 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 FAM215AQ9Y5M1 114 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 TRBV7-1A0A0A6YYK4 115 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 IGHV3-73A0A0B4J1V6 119 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 VCYO14598 125 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 TMEM131Q92545 1883 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 LTBP2Q14767 1821 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 FCN3O75636 299 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 HLA-DMBP28068 263 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 CREBBPQ92793 2442 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 LINC01549A6NIU2 74 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 TAX1BP3O14907 124 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 LHBP01229 141 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 C3orf36Q3SXR2 165 aa11.76□□□□□ -0.53
RRP1B-201ENST00000340648 CEND1Q8N111 149 aa11.75□□□□□ -0.53
RRP1B-201ENST00000340648 ZNF688P0C7X2 276 aa11.75□□□□□ -0.53
RRP1B-201ENST00000340648 LINC01545Q5VT33 79 aa11.75□□□□□ -0.53
RRP1B-201ENST00000340648 RITA1Q96K30 269 aa11.75□□□□□ -0.53
RRP1B-201ENST00000340648 EGR2P11161 476 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-201ENST00000340648 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
RRP1B-201ENST00000340648 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
RRP1B-201ENST00000340648 C1orf122Q6ZSJ8 110 aa11.75□□□□□ -0.53
RRP1B-201ENST00000340648 ZNF503Q96F45 646 aa11.75□□□□□ -0.53
RRP1B-201ENST00000340648 EML6Q6ZMW3 1958 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 SIVA1O15304 175 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 ATP6V0E1O15342 81 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 CTSZQ9UBR2 303 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 ADAMTS9Q9P2N4 1935 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 MYMXA0A1B0GTQ4 84 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 C9JAW5 83 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 F8W1H4 67 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 M0R2P5 195 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 PROP1O75360 226 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 MRPL36Q9P0J6 103 aaKnown RBP11.74□□□□□ -0.53
RRP1B-201ENST00000340648 TP53TG1Q9Y2A0 90 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.74□□□□□ -0.53
RRP1B-201ENST00000340648 E7EUB6 86 aa11.74□□□□□ -0.53
RRP1B-201ENST00000340648 TP53TG3Q9ULZ0 132 aa11.73□□□□□ -0.53
RRP1B-201ENST00000340648 G3V318 75 aa11.73□□□□□ -0.53
RRP1B-201ENST00000340648 GAGE12HA6NDE8 117 aa11.73□□□□□ -0.53
RRP1B-201ENST00000340648 IGFBPL1Q8WX77 278 aa11.73□□□□□ -0.53
RRP1B-201ENST00000340648 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
RRP1B-201ENST00000340648 GATA1P15976 413 aaPredicted RBP11.73□□□□□ -0.53
RRP1B-201ENST00000340648 AZU1P20160 251 aa11.73□□□□□ -0.53
RRP1B-201ENST00000340648 SAA4P35542 130 aa11.73□□□□□ -0.53
RRP1B-201ENST00000340648 NEGR1Q7Z3B1 354 aa11.72□□□□□ -0.53
RRP1B-201ENST00000340648 PRADC1Q9BSG0 188 aa11.72□□□□□ -0.53
RRP1B-201ENST00000340648 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
RRP1B-201ENST00000340648 PLEKHB2Q96CS7 222 aa11.72□□□□□ -0.53
RRP1B-201ENST00000340648 DUSP14O95147 198 aaKnown RBP11.72□□□□□ -0.53
RRP1B-201ENST00000340648 PRR30Q53SZ7 412 aaPredicted RBP11.72□□□□□ -0.53
RRP1B-201ENST00000340648 C8orf86Q6ZUL3 223 aa11.71□□□□□ -0.53
RRP1B-201ENST00000340648 TRBV7-9A0A0J9YWB2 115 aa11.71□□□□□ -0.53
RRP1B-201ENST00000340648 C2orf70A6NJV1 201 aa11.71□□□□□ -0.53
RRP1B-201ENST00000340648 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.53
RRP1B-201ENST00000340648 TP73-AS1Q9UF72 201 aa11.71□□□□□ -0.53
RRP1B-201ENST00000340648 TRGV11A0A075B6L2 103 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms