RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 COL6A6A6NMZ7 2263 aa12.08□□□□□ -0.47
LIMK2-203ENST00000340552 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.47
LIMK2-203ENST00000340552 IGKCP01834 107 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 WT1-ASQ06250 92 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 KLF17Q5JT82 389 aaPredicted RBP12.08□□□□□ -0.48
LIMK2-203ENST00000340552 ZC2HC1BQ5TFG8 222 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 Q6AWC8 147 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 ZNRD1Q9P1U0 126 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 SHISA9B4DS77 424 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 CCL21O00585 134 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 CRYGCP07315 174 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 EVI2AP22794 236 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 CRIP1P50238 77 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 CCL8P80075 99 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.48
LIMK2-203ENST00000340552 RBP4P02753 201 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 CGB3P0DN86 165 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 CGB7P0DN87 165 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 HOXB4P17483 251 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-203ENST00000340552 ZCCHC24Q8N2G6 241 aaKnown RBP12.07□□□□□ -0.48
LIMK2-203ENST00000340552 FAM90A27PA6NNH2 459 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 FCER1GP30273 86 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 C10orf55Q5SWW7 151 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 LYZL1Q6UWQ5 148 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 PTH2Q96A98 100 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 SRSF8Q9BRL6 282 aaKnown RBP12.07□□□□□ -0.48
LIMK2-203ENST00000340552 RELNP78509 3460 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 CGB1A6NKQ9 187 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 C17orf100A8MU93 164 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-203ENST00000340552 MORN3Q6PF18 240 aaPredicted RBP12.07□□□□□ -0.48
LIMK2-203ENST00000340552 CARD19Q96LW7 228 aa12.07□□□□□ -0.48
LIMK2-203ENST00000340552 LINC01548A6NM66 108 aa12.06□□□□□ -0.48
LIMK2-203ENST00000340552 PRSS1P07477 247 aa12.06□□□□□ -0.48
LIMK2-203ENST00000340552 TAL2Q16559 108 aa12.06□□□□□ -0.48
LIMK2-203ENST00000340552 PSMG4Q5JS54 123 aa12.06□□□□□ -0.48
LIMK2-203ENST00000340552 DEFB108BQ8NET1 73 aa12.06□□□□□ -0.48
LIMK2-203ENST00000340552 HIST1H4GQ99525 98 aa12.06□□□□□ -0.48
LIMK2-203ENST00000340552 OTORQ9NRC9 128 aa12.06□□□□□ -0.48
LIMK2-203ENST00000340552 TNFRSF1AP19438 455 aa12.06□□□□□ -0.48
LIMK2-203ENST00000340552 RAI1Q7Z5J4 1906 aaPredicted RBP12.05□□□□□ -0.48
LIMK2-203ENST00000340552 TPRP12270 2363 aaKnown RBP12.05□□□□□ -0.48
LIMK2-203ENST00000340552 TMSB15BA0A087X1C1 80 aa12.05□□□□□ -0.48
LIMK2-203ENST00000340552 CKS2P33552 79 aa12.05□□□□□ -0.48
LIMK2-203ENST00000340552 C8orf46Q8TAG6 207 aa12.05□□□□□ -0.48
LIMK2-203ENST00000340552 FOXC2Q99958 501 aa12.05□□□□□ -0.48
LIMK2-203ENST00000340552 TRBV7-3A0A075B6L6 115 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 TMEM8BA6NDV4 472 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 BRI3O95415 125 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 LY6DQ14210 128 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 DUX4L9Q6RFH8 374 aaPredicted RBP12.04□□□□□ -0.48
LIMK2-203ENST00000340552 LINC01560Q8TB33 94 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 ABCA1O95477 2261 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 E7EQL1 145 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 HLA-DRB4P13762 266 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 LEPP41159 167 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 ZFAND6Q6FIF0 208 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 SMIM20Q8N5G0 67 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 HLA-DRB4X5D2U9 266 aa12.04□□□□□ -0.48
LIMK2-203ENST00000340552 DPM2O94777 84 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 CNIH1O95406 144 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 GRNP28799 593 aaKnown RBP12.03□□□□□ -0.48
LIMK2-203ENST00000340552 FBXL19-AS1Q494R0 122 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 RNASE6Q93091 150 aaKnown RBP12.03□□□□□ -0.48
LIMK2-203ENST00000340552 CCL13Q99616 98 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 KALRNO60229 2985 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.03□□□□□ -0.48
LIMK2-203ENST00000340552 ANXA2RQ3ZCQ2 193 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 TMEM158Q8WZ71 300 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 GAFA1Q96PS6 74 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 PRORYQ9H606 182 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 TMEM160Q9NX00 188 aa12.03□□□□□ -0.48
LIMK2-203ENST00000340552 TRAV40A0A0B4J280 105 aa12.02□□□□□ -0.48
LIMK2-203ENST00000340552 RPL32P62910 135 aaKnown RBP12.02□□□□□ -0.48
LIMK2-203ENST00000340552 ADORA2A-AS1P86434 159 aa12.02□□□□□ -0.48
LIMK2-203ENST00000340552 DLX4Q92988 240 aaPredicted RBP12.02□□□□□ -0.48
LIMK2-203ENST00000340552 ANKHD1Q8IWZ3 2542 aaKnown RBP12.02□□□□□ -0.49
LIMK2-203ENST00000340552 TRBV6-1A0A0K0K1D8 114 aa12.02□□□□□ -0.49
LIMK2-203ENST00000340552 INS-IGF2F8WCM5 200 aa12.02□□□□□ -0.49
LIMK2-203ENST00000340552 GAS8-AS1O95177 125 aa12.02□□□□□ -0.49
LIMK2-203ENST00000340552 CD3EP07766 207 aa12.02□□□□□ -0.49
LIMK2-203ENST00000340552 TEX36Q5VZQ5 186 aa12.02□□□□□ -0.49
LIMK2-203ENST00000340552 TEX29Q8N6K0 151 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 FAM216BQ8N7L0 139 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 PPDPFLQ8WWR9 84 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 C8orf49Q96NF6 230 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 DYNLRB1Q9NP97 96 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 IGHV3-21A0A0B4J1V1 117 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 CDSNQ15517 529 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 SFTA2Q6UW10 78 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 DIAPH2-AS1Q14236 149 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 TMEM75Q8N9X5 138 aa12.01□□□□□ -0.49
LIMK2-203ENST00000340552 ABCA4P78363 2273 aa12□□□□□ -0.49
LIMK2-203ENST00000340552 PSMB2P49721 201 aa12□□□□□ -0.49
LIMK2-203ENST00000340552 SUB1P53999 127 aaKnown RBP eCLIP12□□□□□ -0.49
LIMK2-203ENST00000340552 TWIST1Q15672 202 aa12□□□□□ -0.49
LIMK2-203ENST00000340552 C17orf77Q96MU5 243 aa12□□□□□ -0.49
LIMK2-203ENST00000340552 TRGV9Q99603 122 aa12□□□□□ -0.49
LIMK2-203ENST00000340552 CITED1Q99966 193 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms