RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PGPA6NDG6 321 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 GGTLC3B5MD39 225 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 DIRC3C9JPN6 131 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 SLC25A5P05141 298 aaKnown RBP9.29□□□□□ -0.92
SRSF3-201ENST00000339436 RBMY1A1P0DJD3 496 aaKnown RBP9.29□□□□□ -0.92
SRSF3-201ENST00000339436 RBMY1CP0DJD4 496 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 TSPOP30536 169 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 RBMY1FQ15415 496 aaKnown RBP9.29□□□□□ -0.92
SRSF3-201ENST00000339436 TMEM78Q5T7P6 136 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 EIF5AL1Q6IS14 154 aaKnown RBP9.29□□□□□ -0.92
SRSF3-201ENST00000339436 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 MUC7Q8TAX7 377 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 CMTM2Q8TAZ6 248 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 NEU1Q99519 415 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 VGLL1Q99990 258 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 AGPAT4-IT1Q9H0P7 198 aa9.29□□□□□ -0.92
SRSF3-201ENST00000339436 DEFB4AO15263 64 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 LEPP41159 167 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 NKX2-5P52952 324 aaPredicted RBP9.28□□□□□ -0.92
SRSF3-201ENST00000339436 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 GFI1BQ5VTD9 330 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 C5orf17Q8NAS9 161 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 Q8TAT8 98 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 FAM19A4Q96LR4 140 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 LINC00477Q96M19 166 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 TMEM208Q9BTX3 173 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 TMPRSS5Q9H3S3 457 aa9.28□□□□□ -0.92
SRSF3-201ENST00000339436 A0A1W2PRE2 83 aa9.27□□□□□ -0.93
SRSF3-201ENST00000339436 SMIM9A6NGZ8 99 aa9.27□□□□□ -0.93
SRSF3-201ENST00000339436 CRISP2P16562 243 aa9.27□□□□□ -0.93
SRSF3-201ENST00000339436 GNG5P63218 68 aa9.27□□□□□ -0.93
SRSF3-201ENST00000339436 TMEM256Q8N2U0 113 aa9.27□□□□□ -0.93
SRSF3-201ENST00000339436 MBD3L1Q8WWY6 194 aa9.27□□□□□ -0.93
SRSF3-201ENST00000339436 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
SRSF3-201ENST00000339436 RPH3ALQ9UNE2 315 aa9.27□□□□□ -0.93
SRSF3-201ENST00000339436 YTHDF2Q9Y5A9 579 aaKnown RBP9.27□□□□□ -0.93
SRSF3-201ENST00000339436 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.93
SRSF3-201ENST00000339436 PLECQ15149 4684 aaKnown RBP9.27□□□□□ -0.93
SRSF3-201ENST00000339436 KLLNB2CW77 178 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 RAB5CP51148 216 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 ZNF138P52744 262 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 SFT2D1Q8WV19 159 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 C20orf144Q9BQM9 153 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 KMT2CQ8NEZ4 4911 aaKnown RBP9.26□□□□□ -0.93
SRSF3-201ENST00000339436 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 SERTM2A0A1B0GWG4 89 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 FAM74A7A6NL05 159 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 J3KRW8 73 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 HBE1P02100 147 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 TCRAP04437 139 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 NMBP08949 121 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 SULT1A2P50226 295 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 UBE2G2P60604 165 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 ZFAND2AQ8N6M9 145 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 IL17DQ8TAD2 202 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 ARL2-SNX15V9GYD0 113 aa9.26□□□□□ -0.93
SRSF3-201ENST00000339436 C7orf71A4D174 169 aa9.25□□□□□ -0.93
SRSF3-201ENST00000339436 C3orf84H3BNL1 204 aa9.25□□□□□ -0.93
SRSF3-201ENST00000339436 H2AFB1P0C5Y9 115 aa9.25□□□□□ -0.93
SRSF3-201ENST00000339436 SUMO1P63165 101 aaKnown RBP9.25□□□□□ -0.93
SRSF3-201ENST00000339436 RRN3P1Q2M238 152 aa9.25□□□□□ -0.93
SRSF3-201ENST00000339436 NKX6-2Q9C056 277 aaPredicted RBP9.25□□□□□ -0.93
SRSF3-201ENST00000339436 TRAV8-1A0A0A6YYK1 113 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 LOC102723971A0A1B0GUV8 181 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 A0A1B0GV50 99 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 H7BYZ3 331 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 TAS2R60P59551 318 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 BTN1A1Q13410 526 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 PRR9Q5T870 116 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 CYB561D1Q8N8Q1 229 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 ATG101Q9BSB4 218 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 LENEPQ9Y5L5 61 aa9.24□□□□□ -0.93
SRSF3-201ENST00000339436 TRAV1-1A0A0B4J248 108 aa9.23□□□□□ -0.93
SRSF3-201ENST00000339436 TRAV12-3A0A0B4J271 114 aa9.23□□□□□ -0.93
SRSF3-201ENST00000339436 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
SRSF3-201ENST00000339436 ZNF705GA8MUZ8 300 aaPredicted RBP9.23□□□□□ -0.93
SRSF3-201ENST00000339436 GPX1P07203 203 aa9.23□□□□□ -0.93
SRSF3-201ENST00000339436 C11orf45Q8TAV5 145 aa9.23□□□□□ -0.93
SRSF3-201ENST00000339436 LINC01587Q99440 93 aa9.23□□□□□ -0.93
SRSF3-201ENST00000339436 NIPSNAP3BQ9BS92 247 aa9.23□□□□□ -0.93
SRSF3-201ENST00000339436 EPDR1Q9UM22 224 aa9.23□□□□□ -0.93
SRSF3-201ENST00000339436 K7EQM0 130 aa9.22□□□□□ -0.93
SRSF3-201ENST00000339436 PRM2P04554 102 aa9.22□□□□□ -0.93
SRSF3-201ENST00000339436 ZFAND6Q6FIF0 208 aa9.22□□□□□ -0.93
SRSF3-201ENST00000339436 CELA1Q9UNI1 258 aa9.22□□□□□ -0.93
SRSF3-201ENST00000339436 PEX7O00628 323 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 ZNF324O75467 553 aaPredicted RBP9.21□□□□□ -0.93
SRSF3-201ENST00000339436 IFNA7P01567 189 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 IGLV2-11P01706 119 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 RNASE4P34096 147 aaKnown RBP9.21□□□□□ -0.93
SRSF3-201ENST00000339436 PPT1P50897 306 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 EMP1P54849 157 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 NANOS2P60321 138 aaKnown RBP9.21□□□□□ -0.93
SRSF3-201ENST00000339436 PMS2P11Q13670 270 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 CASC10Q5T4H9 136 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 CST9LP1Q5W188 147 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 ALKAL2Q6UX46 152 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 CCDC28AQ8IWP9 274 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms