RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 GPHB5Q86YW7 130 aa5.65□□□□□ -1.51
SRFBP1-201ENST00000339397 OR2D3Q8NGH3 330 aa5.65□□□□□ -1.51
SRFBP1-201ENST00000339397 DAZAP1Q96EP5 407 aaKnown RBP5.65□□□□□ -1.51
SRFBP1-201ENST00000339397 C20orf173Q96LM9 149 aa5.65□□□□□ -1.51
SRFBP1-201ENST00000339397 SMR3AQ99954 134 aa5.65□□□□□ -1.51
SRFBP1-201ENST00000339397 ZNF702PQ9H963 129 aa5.65□□□□□ -1.51
SRFBP1-201ENST00000339397 SCGB2A1O75556 95 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 C8orf86Q6ZUL3 223 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 GBGT1Q8N5D6 347 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 PRR25Q96S07 402 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 FAM181BA6NEQ2 426 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 CSN1S1P47710 185 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 RPL11P62913 178 aaKnown RBP5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 PSG9Q00887 426 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 PRSS57Q6UWY2 283 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 USMG5Q96IX5 58 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 TPPP3Q9BW30 176 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 HIVEP2P31629 2446 aa5.64□□□□□ -1.51
SRFBP1-201ENST00000339397 NPIPB6E9PJ23 425 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 S100A2P29034 98 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 FOXA3P55318 350 aaPredicted RBP5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 KRTAP1-1Q07627 177 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 DEFB136Q30KP8 78 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 S100A7AQ86SG5 101 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 GLMPQ8WWB7 406 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 RCHY1Q96PM5 261 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 GNB1LQ9BYB4 327 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 NIT2Q9NQR4 276 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 ZMAT5Q9UDW3 170 aaKnown RBP5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 AGRNO00468 2067 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 FN1P02751 2386 aaKnown RBP5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 F6UB75 175 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 K7EQM0 130 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 NDUFA4O00483 81 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 COA6Q5JTJ3 125 aaKnown RBP5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 C9orf139Q6ZV77 190 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 PACRGQ96M98 296 aaPredicted RBP5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 DUX3Q96PT4 197 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 NPFFR1Q9GZQ6 430 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 AGPAT4-IT1Q9H0P7 198 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 ZFP30Q9Y2G7 519 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 HIVEP1P15822 2718 aa5.63□□□□□ -1.51
SRFBP1-201ENST00000339397 TRAV9-1A0A075B6T8 112 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 A8MWL6 223 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 CRISP2P16562 243 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 SRIP30626 198 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 IQCJQ1A5X6 159 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 LURAP1LQ8IV03 231 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 SMIM12Q96EX1 92 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 RHPN1-AS1Q9BWJ2 59 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 GSN-AS1Q9NRJ2 163 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 ZNF492Q9P255 531 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 PEF1Q9UBV8 284 aaKnown RBP5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 LINC00587B1AMM8 73 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 SH2D1AO60880 128 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 SERF1AO75920 110 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 ARMS2P0C7Q2 107 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 KIR3DS1Q14943 382 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 C11orf44Q8N8P7 122 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 C16orf92Q96LL3 132 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 ESM1Q9NQ30 184 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 NOTCH3Q9UM47 2321 aa5.62□□□□□ -1.51
SRFBP1-201ENST00000339397 A0A087X0K7 114 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 A0A0G2JLM5 398 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 A0A1B0GXF2 115 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 H3BUA1 57 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 C1orf194Q5T5A4 169 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 WFDC3Q8IUB2 231 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 WFDC12Q8WWY7 111 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 TMEM190Q8WZ59 177 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 PRDM13Q9H4Q3 707 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 JMJD1CQ15652 2540 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 TRBV6-1A0A0K0K1D8 114 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 M0QZ24 198 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 BRI3O95415 125 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 APCSP02743 223 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 TCTEX1D4Q5JR98 221 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 FAM209BQ5JX69 171 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 WIPF2Q8TF74 440 aaPredicted RBP5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 C11orf21Q9P2W6 132 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 VWFP04275 2813 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 IGHV4OR15-8A0A075B7B6 117 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 A0A087WW49 117 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 SPRY2O43597 315 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 ZNF253O75346 499 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 TFPI2P48307 235 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 SYNJ2BPP57105 145 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 PRR9Q5T870 116 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 RBPMS2Q6ZRY4 209 aaKnown RBP5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 RNF114Q9Y508 228 aa5.61□□□□□ -1.51
SRFBP1-201ENST00000339397 IGHV7-4-1A0A0J9YVY3 117 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 TMEM213A2RRL7 107 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 A8MWP6 167 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 CT45A10P0DMU9 189 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 FAM162BQ5T6X4 162 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 BAGE3Q86Y29 109 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 FAM19A2Q8N3H0 131 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 DAZ1Q9NQZ3 744 aaKnown RBP5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 SOCS3O14543 225 aa5.6□□□□□ -1.51
SRFBP1-201ENST00000339397 HLA-DQA1P01909 254 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms