RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 C18orf32Q8TCD1 76 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 GLMPQ8WWB7 406 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
SCNN1A-202ENST00000338748 A8MWP6 167 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 Q6ZWC4 215 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 ARL6IP6Q8N6S5 226 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 SELENOKQ9Y6D0 94 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 PDZD2O15018 2839 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 NDUFA4O00483 81 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 EDN2P20800 178 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 FOXA3P55318 350 aaPredicted RBP12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 COX8CQ7Z4L0 72 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 LRRC75A-AS1Q8N1F1 130 aa12.42□□□□□ -0.42
SCNN1A-202ENST00000338748 FAM162BQ5T6X4 162 aa12.41□□□□□ -0.42
SCNN1A-202ENST00000338748 GPHB5Q86YW7 130 aa12.41□□□□□ -0.42
SCNN1A-202ENST00000338748 SLC50A1Q9BRV3 221 aa12.41□□□□□ -0.42
SCNN1A-202ENST00000338748 ALKBH7Q9BT30 221 aaPredicted RBP12.41□□□□□ -0.42
SCNN1A-202ENST00000338748 TPPP3Q9BW30 176 aa12.41□□□□□ -0.42
SCNN1A-202ENST00000338748 PSMB8P28062 276 aa12.41□□□□□ -0.42
SCNN1A-202ENST00000338748 ZNF575Q86XF7 245 aa12.41□□□□□ -0.42
SCNN1A-202ENST00000338748 A0A1W2PS18 150 aa12.4□□□□□ -0.42
SCNN1A-202ENST00000338748 SAPCD1Q5SSQ6 148 aa12.4□□□□□ -0.42
SCNN1A-202ENST00000338748 IL17RELQ6ZVW7 336 aa12.4□□□□□ -0.42
SCNN1A-202ENST00000338748 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
SCNN1A-202ENST00000338748 KCNS1Q96KK3 526 aa12.39□□□□□ -0.43
SCNN1A-202ENST00000338748 C20orf173Q96LM9 149 aa12.39□□□□□ -0.43
SCNN1A-202ENST00000338748 NF1P21359 2839 aa12.39□□□□□ -0.43
SCNN1A-202ENST00000338748 HAX1O00165 279 aa12.39□□□□□ -0.43
SCNN1A-202ENST00000338748 PKIAP61925 76 aa12.39□□□□□ -0.43
SCNN1A-202ENST00000338748 TM4SF20Q53R12 229 aa12.39□□□□□ -0.43
SCNN1A-202ENST00000338748 SAMD10Q9BYL1 202 aa12.39□□□□□ -0.43
SCNN1A-202ENST00000338748 ANK3Q12955 4377 aaKnown RBP12.39□□□□□ -0.43
SCNN1A-202ENST00000338748 A0A1B0GUT8 65 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 HOXA3O43365 443 aaPredicted RBP12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 SSTP61278 116 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 Q6YL49 198 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 C9orf139Q6ZV77 190 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 DUX5Q96PT3 197 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 NPFFR1Q9GZQ6 430 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 AGPAT4-IT1Q9H0P7 198 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 MUC21A0A0G2JKD1 596 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 A0A0G2JLM5 398 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 MUC21A0A140T8X8 626 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 TMEM189A5PLL7 270 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 M0QZ24 198 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 GPX1P07203 203 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 ZNF705DP0CH99 300 aaPredicted RBP12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 ZNF705BP0CI00 300 aaPredicted RBP12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 PMCHP20382 165 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 DEFB1P60022 68 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 DEFA6Q01524 100 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 FAM19A2Q8N3H0 131 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 WFDC11Q8NEX6 87 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 PSMG3-AS1Q96PY0 264 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 ZNF580Q9UK33 172 aa12.38□□□□□ -0.43
SCNN1A-202ENST00000338748 ACANP16112 2415 aa12.37□□□□□ -0.43
SCNN1A-202ENST00000338748 C16orf92Q96LL3 132 aa12.37□□□□□ -0.43
SCNN1A-202ENST00000338748 UNC79Q9P2D8 2635 aa12.37□□□□□ -0.43
SCNN1A-202ENST00000338748 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
SCNN1A-202ENST00000338748 TSTD3H0UI37 97 aa12.37□□□□□ -0.43
SCNN1A-202ENST00000338748 AMTP48728 403 aa12.37□□□□□ -0.43
SCNN1A-202ENST00000338748 LYZL1Q6UWQ5 148 aa12.37□□□□□ -0.43
SCNN1A-202ENST00000338748 URB1-AS1Q96HZ7 61 aa12.37□□□□□ -0.43
SCNN1A-202ENST00000338748 RBAKDNA6NC62 111 aa12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 SOCS3O14543 225 aa12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 ZNF324O75467 553 aaPredicted RBP12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 RPLP1P05386 114 aaKnown RBP12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 PLA2G2AP14555 144 aa12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 KLF5Q13887 457 aaPredicted RBP12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 Q6ZQT7 251 aa12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 ZNF664Q8N3J9 261 aa12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 ZNF702PQ9H963 129 aa12.36□□□□□ -0.43
SCNN1A-202ENST00000338748 IGKV3-7A0A075B6H7 116 aa12.35□□□□□ -0.43
SCNN1A-202ENST00000338748 LOC102724200A0A096LPH7 203 aaPredicted RBP12.35□□□□□ -0.43
SCNN1A-202ENST00000338748 SCGB1D1O95968 90 aa12.35□□□□□ -0.43
SCNN1A-202ENST00000338748 DDTP30046 118 aa12.35□□□□□ -0.43
SCNN1A-202ENST00000338748 PEF1Q9UBV8 284 aaKnown RBP12.35□□□□□ -0.43
SCNN1A-202ENST00000338748 TMEM213A2RRL7 107 aa12.35□□□□□ -0.43
SCNN1A-202ENST00000338748 SIGLECL1Q8N7X8 197 aa12.35□□□□□ -0.43
SCNN1A-202ENST00000338748 C14orf144Q96I85 54 aa12.35□□□□□ -0.43
SCNN1A-202ENST00000338748 NIT1Q86X76 327 aa12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 MRPL53Q96EL3 112 aaKnown RBP12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 NDFIP1Q9BT67 221 aa12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 RHPN1-AS1Q9BWJ2 59 aa12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 C11orf21Q9P2W6 132 aa12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 IGHV7-4-1A0A0J9YVY3 117 aa12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 NRN1Q9NPD7 142 aa12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 DAZ1Q9NQZ3 744 aaKnown RBP12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 NAGKQ9UJ70 344 aa12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 GCN1Q92616 2671 aaKnown RBP12.34□□□□□ -0.43
SCNN1A-202ENST00000338748 SRD5A1P18405 259 aa12.33□□□□□ -0.44
SCNN1A-202ENST00000338748 NTF3P20783 257 aa12.33□□□□□ -0.44
SCNN1A-202ENST00000338748 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
SCNN1A-202ENST00000338748 RIGQ13278 110 aa12.33□□□□□ -0.44
SCNN1A-202ENST00000338748 Q6AWC8 147 aa12.33□□□□□ -0.44
SCNN1A-202ENST00000338748 CYB5R2Q6BCY4 276 aa12.33□□□□□ -0.44
SCNN1A-202ENST00000338748 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms