RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 NEDD8Q15843 81 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 WHAMMP3Q1A5X7 153 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 DEFB113Q30KQ7 82 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 ASB16-AS1Q495Z4 193 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 ARPINQ7Z6K5 226 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 CLECL1Q8IZS7 167 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 C10orf111Q8N326 155 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 CLEC2BQ92478 149 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 TMEM203Q969S6 136 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 Q96M85 177 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 NABP2Q9BQ15 211 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 C2orf88Q9BSF0 95 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 LINC00470Q9BZP3 86 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 COMMD3Q9UBI1 195 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 RTTNQ86VV8 2226 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 IBTKQ9P2D0 1353 aaPredicted RBP0.85□□□□□ -2.27
XRCC4-202ENST00000338635 FAM135BQ49AJ0 1406 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 PXDNLA1KZ92 1463 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 SCN3AQ9NY46 2000 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 BICRAQ9NZM4 1560 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 MED12LQ86YW9 2145 aa0.85□□□□□ -2.27
XRCC4-202ENST00000338635 LINC00587B1AMM8 73 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 GNG7O60262 68 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 RBP4P02753 201 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 CXCL8P10145 99 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 CCL4P13236 92 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 GUCA1AP43080 201 aaPredicted RBP0.84□□□□□ -2.27
XRCC4-202ENST00000338635 SNRPD3P62318 126 aaKnown RBP0.84□□□□□ -2.27
XRCC4-202ENST00000338635 DIAPH2-AS1Q14236 149 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 ATOH7Q8N100 152 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 OR5AS1Q8N127 324 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 SPACA4Q8TDM5 124 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 PSMF1Q92530 271 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 GGACTQ9BVM4 153 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 TMEM191AQ9H0A3 160 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 CST11Q9H112 138 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 SLC35B3Q9H1N7 401 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 SAR1AQ9NR31 198 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 CCDC167Q9P0B6 97 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 DNAJC15Q9Y5T4 150 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 MPC1Q9Y5U8 109 aa0.84□□□□□ -2.27
XRCC4-202ENST00000338635 KDM6AO15550 1401 aaPredicted RBP0.84□□□□□ -2.27
XRCC4-202ENST00000338635 PRG4Q92954 1404 aaPredicted RBP0.84□□□□□ -2.27
XRCC4-202ENST00000338635 LTBP2Q14767 1821 aa0.84□□□□□ -2.28
XRCC4-202ENST00000338635 MDC1Q14676 2089 aaKnown RBP0.84□□□□□ -2.28
XRCC4-202ENST00000338635 IGHV1-24A0A0C4DH33 117 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 LOC107984156A0A0G2JMH3 177 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 C3orf85A0A1B0GTC6 90 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 FAM236AA0A1B0GUQ0 79 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 FAM236BA0A1B0GV22 79 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 MIF4GDA9UHW6 222 aaKnown RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 ZNF670-ZNF695F2Z2N8 137 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 J3QRE1 110 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 IFNGP01579 166 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 CD2P06729 351 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 PLGLB1Q02325 96 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 C1orf137Q5JT78 98 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 CLLU1Q5K131 121 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 IZUMO2Q6UXV1 221 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 FP248Q71RG6 208 aaPredicted RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 ARL17AQ8IVW1 177 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 OTOSQ8NHW6 89 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 SMIM7Q9BQ49 75 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 METTL1Q9UBP6 276 aaKnown RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 SOX21Q9Y651 276 aaPredicted RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 CHCHD2Q9Y6H1 151 aaPredicted RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 TNS3Q68CZ2 1445 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 DISP1Q96F81 1524 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 GLI3P10071 1580 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 KDM5CP41229 1560 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 FRMPD1Q5SYB0 1578 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 TRBV20-1A0A075B6N2 111 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 A0A0G2JMM0 328 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 A0A1W2PPB8 328 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 IFITM5A6NNB3 132 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 BBIP1A8MTZ0 92 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 KIR3DP1A8MWS1 328 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 ZNF736B4DX44 427 aaPredicted RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 C5orf67F2Z3F1 127 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 ADGRB3O60242 1522 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 ROCK2O75116 1388 aaKnown RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 HYPMO75409 117 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 CD3DP04234 171 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 CD14P08571 375 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 COL4A2P08572 1712 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 FREM3P0C091 2139 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 PYYP10082 97 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 S100PP25815 95 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 CNBPP62633 177 aaKnown RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 MIR22HGQ0VDD5 57 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 CCSMST1Q4G0I0 132 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 FREM1Q5H8C1 2179 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 SCIMPQ6UWF3 145 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 TEX261Q6UWH6 196 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 CASC2Q6XLA1 102 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 ZNF833PQ6ZTB9 187 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 SMG6Q86US8 1419 aaKnown RBP0.83□□□□□ -2.28
XRCC4-202ENST00000338635 COA5Q86WW8 74 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 GKN2Q86XP6 184 aa0.83□□□□□ -2.28
XRCC4-202ENST00000338635 LINC00269Q8N2A0 174 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms