RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 Q6ZSV7 163 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 DUX5Q96PT3 197 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 MRPL18Q9H0U6 180 aaKnown RBP12.36□□□□□ -0.43
HPS1-202ENST00000338546 LENEPQ9Y5L5 61 aa12.36□□□□□ -0.43
HPS1-202ENST00000338546 GCN1Q92616 2671 aaKnown RBP12.35□□□□□ -0.43
HPS1-202ENST00000338546 XKRY2A2RUG3 117 aa12.35□□□□□ -0.43
HPS1-202ENST00000338546 RNASE1P07998 156 aaKnown RBP12.35□□□□□ -0.43
HPS1-202ENST00000338546 RPS20P60866 119 aaKnown RBP12.35□□□□□ -0.43
HPS1-202ENST00000338546 RNF182Q8N6D2 247 aa12.35□□□□□ -0.43
HPS1-202ENST00000338546 TLN2Q9Y4G6 2542 aa12.35□□□□□ -0.43
HPS1-202ENST00000338546 PRAC2D3DTV9 90 aa12.35□□□□□ -0.43
HPS1-202ENST00000338546 ZNF138P52744 262 aa12.35□□□□□ -0.43
HPS1-202ENST00000338546 TMEM78Q5T7P6 136 aa12.35□□□□□ -0.43
HPS1-202ENST00000338546 C8orf49Q96NF6 230 aa12.35□□□□□ -0.43
HPS1-202ENST00000338546 A0A1B0GXF2 115 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 TMEM213A2RRL7 107 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 AKR1D1P51857 326 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
HPS1-202ENST00000338546 ZNF418Q8TF45 676 aaPredicted RBP12.34□□□□□ -0.43
HPS1-202ENST00000338546 C4orf3Q8WVX3 66 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 GTSF1Q8WW33 167 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 LINC00477Q96M19 166 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 ASCL2Q99929 193 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 AGPAT4-IT1Q9H0P7 198 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 C16orf95Q9H693 158 aa12.34□□□□□ -0.43
HPS1-202ENST00000338546 IGHV4OR15-8A0A075B7B6 117 aa12.33□□□□□ -0.44
HPS1-202ENST00000338546 A0A087WW49 117 aa12.33□□□□□ -0.44
HPS1-202ENST00000338546 A0A1B0GW15 77 aa12.33□□□□□ -0.44
HPS1-202ENST00000338546 ID1P41134 155 aa12.33□□□□□ -0.44
HPS1-202ENST00000338546 HIST3H2BBQ8N257 126 aa12.33□□□□□ -0.44
HPS1-202ENST00000338546 ESM1Q9NQ30 184 aa12.33□□□□□ -0.44
HPS1-202ENST00000338546 TRBV7-9A0A0J9YWB2 115 aa12.32□□□□□ -0.44
HPS1-202ENST00000338546 FABP5P3A8MUU1 101 aa12.32□□□□□ -0.44
HPS1-202ENST00000338546 SPINK4O60575 86 aa12.32□□□□□ -0.44
HPS1-202ENST00000338546 SH2D1AO60880 128 aa12.32□□□□□ -0.44
HPS1-202ENST00000338546 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
HPS1-202ENST00000338546 HBBP68871 147 aa12.32□□□□□ -0.44
HPS1-202ENST00000338546 KLF5Q13887 457 aaPredicted RBP12.32□□□□□ -0.44
HPS1-202ENST00000338546 TCF24Q7RTU0 167 aa12.32□□□□□ -0.44
HPS1-202ENST00000338546 TMEM189A5PLL7 270 aa12.31□□□□□ -0.44
HPS1-202ENST00000338546 SRD5A1P18405 259 aa12.31□□□□□ -0.44
HPS1-202ENST00000338546 RPL11P62913 178 aaKnown RBP12.31□□□□□ -0.44
HPS1-202ENST00000338546 ZNF738Q8NE65 137 aa12.31□□□□□ -0.44
HPS1-202ENST00000338546 Q8TAT8 98 aa12.31□□□□□ -0.44
HPS1-202ENST00000338546 JMJD8Q96S16 334 aa12.31□□□□□ -0.44
HPS1-202ENST00000338546 LINC01619G3V211 115 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 APCSP02743 223 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 FRMD6-AS1P0C7T7 363 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 HILS1P60008 231 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 RAB4BP61018 213 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 HIST1H1AQ02539 215 aaPredicted RBP12.3□□□□□ -0.44
HPS1-202ENST00000338546 Q0VG73 95 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 ERCC8Q13216 396 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 Q71RC1 249 aaPredicted RBP12.3□□□□□ -0.44
HPS1-202ENST00000338546 OR10J6PQ8NGY7 276 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 C20orf173Q96LM9 149 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 AKAP9Q99996 3911 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 M0QZ24 198 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 S100A2P29034 98 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 SYNJ2BPP57105 145 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 RIGQ13278 110 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 LINC00518Q8N0U6 118 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 PGLYRP4Q96LB8 373 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 GPR61Q9BZJ8 451 aa12.3□□□□□ -0.44
HPS1-202ENST00000338546 SONP18583 2426 aaKnown RBP12.3□□□□□ -0.44
HPS1-202ENST00000338546 A0A1B0GUT8 65 aa12.29□□□□□ -0.44
HPS1-202ENST00000338546 CRISP2P16562 243 aa12.29□□□□□ -0.44
HPS1-202ENST00000338546 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
HPS1-202ENST00000338546 GATD1Q8NB37 220 aa12.29□□□□□ -0.44
HPS1-202ENST00000338546 DCANP1Q8TF63 244 aa12.29□□□□□ -0.44
HPS1-202ENST00000338546 DPF1Q92782 380 aa12.29□□□□□ -0.44
HPS1-202ENST00000338546 PEMTQ9UBM1 199 aa12.29□□□□□ -0.44
HPS1-202ENST00000338546 C2orf70A6NJV1 201 aa12.28□□□□□ -0.44
HPS1-202ENST00000338546 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
HPS1-202ENST00000338546 LINC01559Q495D7 138 aa12.28□□□□□ -0.44
HPS1-202ENST00000338546 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
HPS1-202ENST00000338546 OR1N2Q8NGR9 330 aa12.28□□□□□ -0.44
HPS1-202ENST00000338546 BORCS7Q96B45 105 aa12.28□□□□□ -0.44
HPS1-202ENST00000338546 MYO9AB2RTY4 2548 aa12.28□□□□□ -0.44
HPS1-202ENST00000338546 IFITM10A6NMD0 228 aa12.27□□□□□ -0.44
HPS1-202ENST00000338546 SMIM6P0DI80 62 aa12.27□□□□□ -0.44
HPS1-202ENST00000338546 FOSL1P15407 271 aa12.27□□□□□ -0.44
HPS1-202ENST00000338546 GFI1BQ5VTD9 330 aa12.27□□□□□ -0.44
HPS1-202ENST00000338546 OR8A1Q8NGG7 326 aa12.27□□□□□ -0.44
HPS1-202ENST00000338546 SETXQ7Z333 2677 aaKnown RBP12.27□□□□□ -0.45
HPS1-202ENST00000338546 ACANP16112 2415 aa12.27□□□□□ -0.45
HPS1-202ENST00000338546 NDUFA7O95182 113 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 GZMBP10144 247 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 ESDP10768 282 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 GDF5OSQ5U4N7 250 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 OR11H1Q8NG94 326 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 MS4A6AQ9H2W1 248 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 ANK3Q12955 4377 aaKnown RBP12.26□□□□□ -0.45
HPS1-202ENST00000338546 TRAV2A0A0B4J234 112 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 LY6G6DO95868 133 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 PRB4P10163 310 aaPredicted RBP12.26□□□□□ -0.45
HPS1-202ENST00000338546 CAMPP49913 170 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 FAM19A4Q96LR4 140 aa12.26□□□□□ -0.45
HPS1-202ENST00000338546 HECTD1Q9ULT8 2610 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms