RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KHDC3LQ587J8 217 aa10.82□□□□□ -0.68
PRKN-201ENST00000338468 OR2G3Q8NGZ4 309 aa10.82□□□□□ -0.68
PRKN-201ENST00000338468 RNASE8Q8TDE3 154 aaKnown RBP10.82□□□□□ -0.68
PRKN-201ENST00000338468 LINC00477Q96M19 166 aa10.82□□□□□ -0.68
PRKN-201ENST00000338468 HECTD4Q9Y4D8 3996 aa10.82□□□□□ -0.68
PRKN-201ENST00000338468 FXYD6-FXYD2A0A087WZ82 144 aa10.81□□□□□ -0.68
PRKN-201ENST00000338468 TRAV12-3A0A0B4J271 114 aa10.81□□□□□ -0.68
PRKN-201ENST00000338468 KLLNB2CW77 178 aa10.81□□□□□ -0.68
PRKN-201ENST00000338468 HTN1P15515 57 aa10.81□□□□□ -0.68
PRKN-201ENST00000338468 TAS2R45P59539 299 aa10.81□□□□□ -0.68
PRKN-201ENST00000338468 RANP62826 216 aaKnown RBP10.81□□□□□ -0.68
PRKN-201ENST00000338468 PSMG3Q9BT73 122 aaPredicted RBP10.81□□□□□ -0.68
PRKN-201ENST00000338468 SH3BGRL3Q9H299 93 aa10.81□□□□□ -0.68
PRKN-201ENST00000338468 Q9H3A6 140 aa10.81□□□□□ -0.68
PRKN-201ENST00000338468 LYRM9A8MSI8 78 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 HMGB3O15347 200 aaKnown RBP10.8□□□□□ -0.68
PRKN-201ENST00000338468 CRISP2P16562 243 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 DAD1P61803 113 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 CD300CQ08708 224 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 PRR9Q5T870 116 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 RPL7L1Q6DKI1 246 aaKnown RBP10.8□□□□□ -0.68
PRKN-201ENST00000338468 LYPD1Q8N2G4 141 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 ZFAND2AQ8N6M9 145 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 INO80EQ8NBZ0 244 aaPredicted RBP10.8□□□□□ -0.68
PRKN-201ENST00000338468 OR10G4Q8NGN3 311 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 OR10G9Q8NGN4 311 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 OR10G7Q8NGN6 311 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 C16orf74Q96GX8 76 aa10.8□□□□□ -0.68
PRKN-201ENST00000338468 C7orf71A4D174 169 aa10.79□□□□□ -0.68
PRKN-201ENST00000338468 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
PRKN-201ENST00000338468 SLC25A5P05141 298 aaKnown RBP10.79□□□□□ -0.68
PRKN-201ENST00000338468 BTN1A1Q13410 526 aa10.79□□□□□ -0.68
PRKN-201ENST00000338468 PQLC2Q6ZP29 291 aa10.79□□□□□ -0.68
PRKN-201ENST00000338468 ZNF493Q6ZR52 646 aa10.79□□□□□ -0.68
PRKN-201ENST00000338468 TMEM263Q8WUH6 116 aaKnown RBP10.79□□□□□ -0.68
PRKN-201ENST00000338468 ZNF492Q9P255 531 aa10.79□□□□□ -0.68
PRKN-201ENST00000338468 A0A1W2PPV4 95 aa10.78□□□□□ -0.68
PRKN-201ENST00000338468 SMLR1H3BR10 107 aa10.78□□□□□ -0.68
PRKN-201ENST00000338468 DEFB130BP0DP73 79 aa10.78□□□□□ -0.68
PRKN-201ENST00000338468 DEFB130AP0DP74 79 aa10.78□□□□□ -0.68
PRKN-201ENST00000338468 Q6ZQT7 251 aa10.78□□□□□ -0.68
PRKN-201ENST00000338468 Q8TAT8 98 aa10.78□□□□□ -0.68
PRKN-201ENST00000338468 RBAKDNA6NC62 111 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 DIRC3C9JPN6 131 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 STAG3L2P0CL84 134 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 STAG3L3P0CL85 134 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 ARL14EPLP0DKL9 152 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 HTN3P15516 51 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 CDC34P49427 236 aaPredicted RBP10.77□□□□□ -0.69
PRKN-201ENST00000338468 SERF2P84101 59 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 TMEM78Q5T7P6 136 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 SSX7Q7RTT5 188 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 SUN5Q8TC36 379 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 PYGO2Q9BRQ0 406 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 NDUFAF3Q9BU61 184 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 NOP10Q9NPE3 64 aaKnown RBP10.77□□□□□ -0.69
PRKN-201ENST00000338468 OTORQ9NRC9 128 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 CYTL1Q9NRR1 136 aa10.77□□□□□ -0.69
PRKN-201ENST00000338468 TIMM8BQ9Y5J9 83 aaPredicted RBP10.77□□□□□ -0.69
PRKN-201ENST00000338468 NMBP08949 121 aa10.76□□□□□ -0.69
PRKN-201ENST00000338468 RNASE4P34096 147 aaKnown RBP10.76□□□□□ -0.69
PRKN-201ENST00000338468 CSN1S1P47710 185 aa10.76□□□□□ -0.69
PRKN-201ENST00000338468 ZNF138P52744 262 aa10.76□□□□□ -0.69
PRKN-201ENST00000338468 LINC00612Q8N6U2 182 aa10.76□□□□□ -0.69
PRKN-201ENST00000338468 RAB24Q969Q5 203 aa10.76□□□□□ -0.69
PRKN-201ENST00000338468 FAM210BQ96KR6 192 aa10.76□□□□□ -0.69
PRKN-201ENST00000338468 HYLS1Q96M11 299 aa10.76□□□□□ -0.69
PRKN-201ENST00000338468 LINC00467Q9BRT7 94 aa10.76□□□□□ -0.69
PRKN-201ENST00000338468 TRBV7-9A0A0J9YWB2 115 aa10.75□□□□□ -0.69
PRKN-201ENST00000338468 PGPA6NDG6 321 aa10.75□□□□□ -0.69
PRKN-201ENST00000338468 ARPC5O15511 151 aa10.75□□□□□ -0.69
PRKN-201ENST00000338468 GPX1P07203 203 aa10.75□□□□□ -0.69
PRKN-201ENST00000338468 TMEM88Q6PEY1 159 aa10.75□□□□□ -0.69
PRKN-201ENST00000338468 CCDC28AQ8IWP9 274 aa10.75□□□□□ -0.69
PRKN-201ENST00000338468 DNAH2Q9P225 4427 aa10.75□□□□□ -0.69
PRKN-201ENST00000338468 KIAA1109Q2LD37 5005 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 BORCS7-ASMTA0A0B4J1R7 106 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 CBY3A6NI87 242 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 MBP02144 154 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 GCHFRP30047 84 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 ZNF726P1Q15940 193 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 C11orf72Q8NBR9 251 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 OR11H4Q8NGC9 324 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 RXFP4Q8TDU9 374 aa10.74□□□□□ -0.69
PRKN-201ENST00000338468 GNPNAT1Q96EK6 184 aaPredicted RBP10.74□□□□□ -0.69
PRKN-201ENST00000338468 GNG5P63218 68 aa10.73□□□□□ -0.69
PRKN-201ENST00000338468 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
PRKN-201ENST00000338468 ARL6IP6Q8N6S5 226 aa10.73□□□□□ -0.69
PRKN-201ENST00000338468 TP53TG3Q9ULZ0 132 aa10.73□□□□□ -0.69
PRKN-201ENST00000338468 TAAR5O14804 337 aa10.72□□□□□ -0.69
PRKN-201ENST00000338468 DAZ2Q13117 558 aaKnown RBP10.72□□□□□ -0.69
PRKN-201ENST00000338468 GOLT1AQ6ZVE7 132 aa10.72□□□□□ -0.69
PRKN-201ENST00000338468 EIF4E3Q8N5X7 224 aaKnown RBP10.72□□□□□ -0.69
PRKN-201ENST00000338468 TMED6Q8WW62 240 aa10.72□□□□□ -0.69
PRKN-201ENST00000338468 TVP23CQ96ET8 276 aa10.72□□□□□ -0.69
PRKN-201ENST00000338468 ACTR3CQ9C0K3 210 aaPredicted RBP10.72□□□□□ -0.69
PRKN-201ENST00000338468 GSN-AS1Q9NRJ2 163 aa10.72□□□□□ -0.69
PRKN-201ENST00000338468 RPH3ALQ9UNE2 315 aa10.72□□□□□ -0.69
PRKN-201ENST00000338468 RYR1P21817 5038 aa10.72□□□□□ -0.69
PRKN-201ENST00000338468 TRAV8-1A0A0A6YYK1 113 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms