RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 FAM122CQ6P4D5 195 aa9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 SSX7Q7RTT5 188 aa9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 C20orf144Q9BQM9 153 aa9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 TMEM14CQ9P0S9 112 aa9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 TP53TG3Q9ULZ0 132 aa9.29□□□□□ -0.92
NUDCD3-201ENST00000338427 A6NHS1 94 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 SNURFLB1AK76 121 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 INMT-MINDY4F8WBC2 141 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 UPK1BO75841 260 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 CCL18P55774 89 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 PRR9Q5T870 116 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 ENKURQ8TC29 256 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 GNPNAT1Q96EK6 184 aaPredicted RBP9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 FAM19A4Q96LR4 140 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 TMPRSS5Q9H3S3 457 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 KLF12Q9Y4X4 402 aa9.28□□□□□ -0.92
NUDCD3-201ENST00000338427 MUC4Q99102 2169 aa9.27□□□□□ -0.92
NUDCD3-201ENST00000338427 C7orf71A4D174 169 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 E5RGE8 158 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 ZNF253O75346 499 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 RLN2P04090 185 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 OR10J4P0C629 311 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 MED14OSP0DP75 135 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 RXFP4Q8TDU9 374 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 S100ZQ8WXG8 99 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 LINC00477Q96M19 166 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 ODF3Q96PU9 254 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 KRTAP4-5Q9BYR2 181 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 Q9H8V8 135 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.93
NUDCD3-201ENST00000338427 HSPG2P98160 4391 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 KLLNB2CW77 178 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 SLC25A5P05141 298 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 M6PRP20645 277 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 H2BFSP57053 126 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 FAM3BP58499 235 aaPredicted RBP9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 SOHLH1Q5JUK2 328 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 C11orf72Q8NBR9 251 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 FXYD5Q96DB9 178 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 ZNF503Q96F45 646 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 VSIG2Q96IQ7 327 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 PYGO2Q9BRQ0 406 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 KRTAP1-5Q9BYS1 174 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 NMES1Q9C002 83 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 WDR61Q9GZS3 305 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 SLC25A31Q9H0C2 315 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 OR51M1Q9H341 326 aa9.26□□□□□ -0.93
NUDCD3-201ENST00000338427 MPDU1O75352 247 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 GPX1P07203 203 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 DAZ2Q13117 558 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 C9orf47Q6ZRZ4 202 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 LINC00299Q6ZSB3 139 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 C6orf223Q8N319 242 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 ZFAND2AQ8N6M9 145 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 PHYHIPLQ96FC7 376 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 PAXXQ9BUH6 204 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 SMIM3Q9BZL3 60 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 PRELID1Q9Y255 219 aa9.25□□□□□ -0.93
NUDCD3-201ENST00000338427 TRGV1A0A0A0MS02 117 aa9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 IGHV3-53P01767 116 aa9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 RANP62826 216 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 EIF4E3Q8N5X7 224 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 Q8TAT8 98 aa9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 PPP1R1CQ8WVI7 109 aa9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 WFDC1Q9HC57 220 aa9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 ZNF492Q9P255 531 aa9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 DNAH5Q8TE73 4624 aa9.24□□□□□ -0.93
NUDCD3-201ENST00000338427 TRGV2A0A075B6R0 118 aa9.23□□□□□ -0.93
NUDCD3-201ENST00000338427 CRISP2P16562 243 aa9.23□□□□□ -0.93
NUDCD3-201ENST00000338427 PDE6HQ13956 83 aa9.23□□□□□ -0.93
NUDCD3-201ENST00000338427 MARVELD1Q9BSK0 173 aa9.23□□□□□ -0.93
NUDCD3-201ENST00000338427 AAMDCQ9H7C9 122 aa9.23□□□□□ -0.93
NUDCD3-201ENST00000338427 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
NUDCD3-201ENST00000338427 FUT9Q9Y231 359 aa9.23□□□□□ -0.93
NUDCD3-201ENST00000338427 A0A096LPF7 62 aa9.22□□□□□ -0.93
NUDCD3-201ENST00000338427 SPINK4O60575 86 aa9.22□□□□□ -0.93
NUDCD3-201ENST00000338427 MPC2O95563 127 aa9.22□□□□□ -0.93
NUDCD3-201ENST00000338427 ANXA2RQ3ZCQ2 193 aa9.22□□□□□ -0.93
NUDCD3-201ENST00000338427 FFAR4Q5NUL3 377 aa9.22□□□□□ -0.93
NUDCD3-201ENST00000338427 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
NUDCD3-201ENST00000338427 TMEM78Q5T7P6 136 aa9.22□□□□□ -0.93
NUDCD3-201ENST00000338427 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-201ENST00000338427 IGHV1OR15-1A0A075B7D0 117 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 RGS13O14921 159 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 SSNA1O43805 119 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 OR7C2O60412 319 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 PRAF2O60831 178 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 ZNF138P52744 262 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 CYCSP99999 105 aaKnown RBP9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 LINC00467Q9BRT7 94 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 MDFICQ9P1T7 246 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 HSPB11Q9Y547 144 aa9.21□□□□□ -0.94
NUDCD3-201ENST00000338427 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
NUDCD3-201ENST00000338427 RPL12P30050 165 aaKnown RBP9.2□□□□□ -0.94
NUDCD3-201ENST00000338427 TCL1AP56279 114 aa9.2□□□□□ -0.94
NUDCD3-201ENST00000338427 HYLS1Q96M11 299 aa9.2□□□□□ -0.94
NUDCD3-201ENST00000338427 ATP5SQ99766 215 aa9.2□□□□□ -0.94
NUDCD3-201ENST00000338427 Q9H3A6 140 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms