RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ZNF705BP0CI00 300 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 Q8TAT8 98 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SFRP2Q96HF1 295 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 PCP4L1A6NKN8 68 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SAP30O75446 220 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 PRR27Q6MZM9 219 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 TMEM183AQ8IXX5 376 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SMIM12Q96EX1 92 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ZFP30Q9Y2G7 519 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 FBLL1A6NHQ2 334 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 F6UB75 175 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ERVFC1-1P60608 527 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SNRPD3P62318 126 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 S100A12P80511 92 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 PSMG4Q5JS54 123 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 LINC00482Q8N8I6 264 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ANAPC16Q96DE5 110 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 C8orf49Q96NF6 230 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 AGPAT4-IT1Q9H0P7 198 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
CDK5RAP3-201ENST00000338399 IZUMO1RA6ND01 250 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 TMEM78Q5T7P6 136 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 OR10G8Q8NGN5 311 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 CTDSP1Q9GZU7 261 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SORL1Q92673 2214 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ATRQ13535 2644 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 H7BYZ3 331 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 C9orf47Q6ZRZ4 202 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 OR10J6PQ8NGY7 276 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 PRR25Q96S07 402 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 GPR61Q9BZJ8 451 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
CDK5RAP3-201ENST00000338399 TRAV25A0A0B4J276 109 aa11.03□□□□□ -0.64
CDK5RAP3-201ENST00000338399 HIST1H1AQ02539 215 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SAPCD1Q5SSQ6 148 aa11.03□□□□□ -0.64
CDK5RAP3-201ENST00000338399 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-201ENST00000338399 LINC00322Q6ZN03 302 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-201ENST00000338399 OR8A1Q8NGG7 326 aa11.03□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
CDK5RAP3-201ENST00000338399 TENM1Q9UKZ4 2725 aa11.03□□□□□ -0.64
CDK5RAP3-201ENST00000338399 TRAV2A0A0B4J234 112 aa11.02□□□□□ -0.64
CDK5RAP3-201ENST00000338399 PPP1R2P9O14990 202 aa11.02□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ZNF138P52744 262 aa11.02□□□□□ -0.64
CDK5RAP3-201ENST00000338399 C15orf54Q8N8G6 183 aa11.02□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SPAG8Q99932 426 aaPredicted RBP11.02□□□□□ -0.64
CDK5RAP3-201ENST00000338399 OSTCQ9NRP0 149 aa11.02□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ZNF492Q9P255 531 aa11.02□□□□□ -0.64
CDK5RAP3-201ENST00000338399 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.65
CDK5RAP3-201ENST00000338399 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.65
CDK5RAP3-201ENST00000338399 NUDT11Q96G61 164 aa11.02□□□□□ -0.65
CDK5RAP3-201ENST00000338399 NDFIP1Q9BT67 221 aa11.02□□□□□ -0.65
CDK5RAP3-201ENST00000338399 BIN3Q9NQY0 253 aa11.02□□□□□ -0.65
CDK5RAP3-201ENST00000338399 URGCP-MRPS24S4R325 110 aa11.02□□□□□ -0.65
CDK5RAP3-201ENST00000338399 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 IGLV1-51P01701 117 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 CD33P20138 364 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 SPATA3Q8NHX4 192 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 C12orf57Q99622 126 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 ZNF747Q9BV97 191 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 TUBA4BQ9H853 241 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 V9GYV3 84 aa11.01□□□□□ -0.65
CDK5RAP3-201ENST00000338399 OR4C46A6NHA9 309 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 CRIP1P50238 77 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 FAM231DQ6ZW35 169 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 C3orf56Q8N813 242 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 ZNF256Q9Y2P7 627 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 FBN1P35555 2871 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 AGRNO00468 2067 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 CXorf65A6NEN9 183 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 ZNF705GA8MUZ8 300 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 GATCO43716 136 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 CT45A10P0DMU9 189 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 AKR1D1P51857 326 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 DEFB131AP59861 70 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 PPP1R14DQ9NXH3 145 aa11□□□□□ -0.65
CDK5RAP3-201ENST00000338399 A0A0J9YX75 114 aa10.99□□□□□ -0.65
CDK5RAP3-201ENST00000338399 C19orf71A6NCJ1 209 aa10.99□□□□□ -0.65
CDK5RAP3-201ENST00000338399 ZNF80P51504 273 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-201ENST00000338399 C12orf54Q6X4T0 127 aa10.99□□□□□ -0.65
CDK5RAP3-201ENST00000338399 COX8CQ7Z4L0 72 aa10.99□□□□□ -0.65
CDK5RAP3-201ENST00000338399 TMEM158Q8WZ71 300 aa10.99□□□□□ -0.65
CDK5RAP3-201ENST00000338399 P01737 135 aa10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 ELOBQ15370 118 aa10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 EBLN2Q6P2I7 272 aa10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 MAP6D1Q9H9H5 199 aa10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 CA1P00915 261 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 PFN1P07737 140 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 ZNF124Q15973 351 aa10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 YPEL4Q96NS1 127 aa10.98□□□□□ -0.65
CDK5RAP3-201ENST00000338399 COLCA2A8K830 154 aa10.97□□□□□ -0.65
CDK5RAP3-201ENST00000338399 J3KRW8 73 aa10.97□□□□□ -0.65
CDK5RAP3-201ENST00000338399 S100PP25815 95 aa10.97□□□□□ -0.65
CDK5RAP3-201ENST00000338399 FAM3BP58499 235 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-201ENST00000338399 FAM162BQ5T6X4 162 aa10.97□□□□□ -0.65
CDK5RAP3-201ENST00000338399 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
CDK5RAP3-201ENST00000338399 IL36BQ9NZH7 164 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms