RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 LY6G6EA0A0G2JKS1 128 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 H7C1H1 209 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 LOXL1Q08397 574 aaPredicted RBP10.62□□□□□ -0.71
COL2A1-201ENST00000337299 PLSCR4Q9NRQ2 329 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 U3KQA8 63 aa10.62□□□□□ -0.71
COL2A1-201ENST00000337299 C15orf65H3BRN8 121 aa10.61□□□□□ -0.71
COL2A1-201ENST00000337299 GATA1P15976 413 aaPredicted RBP10.61□□□□□ -0.71
COL2A1-201ENST00000337299 PLNP26678 52 aa10.61□□□□□ -0.71
COL2A1-201ENST00000337299 TMPRSS3P57727 454 aa10.61□□□□□ -0.71
COL2A1-201ENST00000337299 FOXI2Q6ZQN5 318 aa10.61□□□□□ -0.71
COL2A1-201ENST00000337299 ANKRD11Q6UB99 2663 aaPredicted RBP10.61□□□□□ -0.71
COL2A1-201ENST00000337299 C8orf86Q6ZUL3 223 aa10.61□□□□□ -0.71
COL2A1-201ENST00000337299 Q8TCH9 128 aa10.61□□□□□ -0.71
COL2A1-201ENST00000337299 TPSG1Q9NRR2 321 aa10.61□□□□□ -0.71
COL2A1-201ENST00000337299 CD3EP07766 207 aa10.61□□□□□ -0.71
COL2A1-201ENST00000337299 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 GAGE7O76087 117 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 GAGE4Q13068 117 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 C2orf82Q6UX34 121 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 C1QTNF4Q9BXJ3 329 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 RNASE1P07998 156 aaKnown RBP10.6□□□□□ -0.71
COL2A1-201ENST00000337299 ERCC8Q13216 396 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 RRN3P1Q2M238 152 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 ORMDL2Q53FV1 153 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 TMEM30BQ3MIR4 351 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 Q6ZSR3 168 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 BOD1L2Q8IYS8 172 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 NDUFA4L2Q9NRX3 87 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 NACAE9PAV3 2078 aa10.6□□□□□ -0.71
COL2A1-201ENST00000337299 SIVA1O15304 175 aa10.59□□□□□ -0.71
COL2A1-201ENST00000337299 IGLV2-8P01709 118 aa10.59□□□□□ -0.71
COL2A1-201ENST00000337299 ASIPP42127 132 aa10.59□□□□□ -0.71
COL2A1-201ENST00000337299 LYNX1G3V0Z9 82 aa10.59□□□□□ -0.71
COL2A1-201ENST00000337299 LYNX1P0DP58 116 aa10.59□□□□□ -0.71
COL2A1-201ENST00000337299 RNF183Q96D59 192 aa10.59□□□□□ -0.71
COL2A1-201ENST00000337299 ZNF503Q96F45 646 aa10.59□□□□□ -0.71
COL2A1-201ENST00000337299 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
COL2A1-201ENST00000337299 C14orf178Q8N769 122 aaPredicted RBP10.59□□□□□ -0.71
COL2A1-201ENST00000337299 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 C16orf54Q6UWD8 224 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 PATE2Q6UY27 113 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 LINC00322Q6ZN03 302 aaPredicted RBP10.58□□□□□ -0.72
COL2A1-201ENST00000337299 FAM167A-AS1Q96KT0 104 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 PRADC1Q9BSG0 188 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 COL4A4P53420 1690 aaPredicted RBP10.58□□□□□ -0.72
COL2A1-201ENST00000337299 BRWD1-AS2P59051 145 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 CNTFRP26992 372 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 IGHV1-46P01743 117 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 CLEC19AQ6UXS0 136 aa10.58□□□□□ -0.72
COL2A1-201ENST00000337299 RNASE4P34096 147 aaKnown RBP10.57□□□□□ -0.72
COL2A1-201ENST00000337299 TMEM200BQ69YZ2 307 aa10.57□□□□□ -0.72
COL2A1-201ENST00000337299 MSRB1Q9NZV6 116 aa10.57□□□□□ -0.72
COL2A1-201ENST00000337299 ZNF474Q6S9Z5 364 aaPredicted RBP10.57□□□□□ -0.72
COL2A1-201ENST00000337299 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
COL2A1-201ENST00000337299 MYMXA0A1B0GTQ4 84 aa10.57□□□□□ -0.72
COL2A1-201ENST00000337299 IFITM1P13164 125 aa10.57□□□□□ -0.72
COL2A1-201ENST00000337299 KIAA1549LQ6ZVL6 1849 aa10.57□□□□□ -0.72
COL2A1-201ENST00000337299 HCFC1P51610 2035 aa10.56□□□□□ -0.72
COL2A1-201ENST00000337299 ZNF688P0C7X2 276 aa10.56□□□□□ -0.72
COL2A1-201ENST00000337299 TCF15Q12870 199 aa10.56□□□□□ -0.72
COL2A1-201ENST00000337299 NTN5Q8WTR8 489 aaPredicted RBP10.56□□□□□ -0.72
COL2A1-201ENST00000337299 TRBV19A0A075B6N1 114 aa10.56□□□□□ -0.72
COL2A1-201ENST00000337299 TIMM23O14925 209 aa10.56□□□□□ -0.72
COL2A1-201ENST00000337299 SPRY2O43597 315 aa10.56□□□□□ -0.72
COL2A1-201ENST00000337299 C17orf58Q2M2W7 97 aa10.56□□□□□ -0.72
COL2A1-201ENST00000337299 CCDC144NLQ6NUI1 221 aa10.56□□□□□ -0.72
COL2A1-201ENST00000337299 TRAV8-3A0A0A6YYJ7 113 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 PRSS46E5RG02 174 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 NEGR1Q7Z3B1 354 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 LINC01560Q8TB33 94 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 MT-ATP8P03928 68 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 OR11H6Q8NGC7 330 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 C9orf153Q5TBE3 101 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 SLC25A20O43772 301 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 GAFA1Q96PS6 74 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 EDA2RQ9HAV5 297 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 C2orf16Q68DN1 1984 aa10.55□□□□□ -0.72
COL2A1-201ENST00000337299 HERV-K104P63124 156 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 FOXI1Q12951 378 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 RNF182Q8N6D2 247 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 SHANK2-AS3Q9BTD1 123 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 SIGLEC9Q9Y336 463 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 C17orf100A8MU93 164 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 SS18L1O75177 396 aaPredicted RBP10.54□□□□□ -0.72
COL2A1-201ENST00000337299 PROP1O75360 226 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 DNAL4O96015 105 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 FGF6P10767 208 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 CIRBPQ14011 172 aaKnown RBP10.54□□□□□ -0.72
COL2A1-201ENST00000337299 PAPPA-AS1Q5QFB9 102 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 MRPL36Q9P0J6 103 aaKnown RBP10.54□□□□□ -0.72
COL2A1-201ENST00000337299 DPM3Q9P2X0 92 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 MYO9AB2RTY4 2548 aa10.54□□□□□ -0.72
COL2A1-201ENST00000337299 IGKV3OR2-268A0A0C4DH90 116 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 PF4V1P10720 104 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
COL2A1-201ENST00000337299 SUMO2P61956 95 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms