RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 NEGR1Q7Z3B1 354 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 ZNRD1Q9P1U0 126 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 SMIM9A6NGZ8 99 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 H3BRN7 92 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 PAX9P55771 341 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 H2BFSP57053 126 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 GNB1LQ9BYB4 327 aa5.85□□□□□ -1.47
EPHA3-201ENST00000336596 DNAJC9-AS1A6NH13 148 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 H3BMM0 161 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 UBE2BP63146 152 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 Q0VG73 95 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 C17orf58Q2M2W7 97 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 C4orf48Q5BLP8 95 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 CT83Q5H943 113 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 TMEM14EPQ6UXP3 125 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 ARL6IP6Q8N6S5 226 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 IGKCP01834 107 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 ATXN8Q156A1 80 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 A0A1W2PPI3 338 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 PYYP10082 97 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 PUSL1Q8N0Z8 303 aaKnown RBP5.84□□□□□ -1.47
EPHA3-201ENST00000336596 MTURNQ8N3F0 131 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 WFDC12Q8WWY7 111 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 AJUBAQ96IF1 538 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 DNAH12Q6ZR08 3092 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 TRAV1-1A0A0B4J248 108 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 SPRY2O43597 315 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 WISP2O76076 250 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 QRFPP83859 136 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 C8orf86Q6ZUL3 223 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 SEM1Q6ZVN7 128 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 LIME1Q9H400 295 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 ANAPC10Q9UM13 185 aa5.84□□□□□ -1.47
EPHA3-201ENST00000336596 YLPM1P49750 1951 aaKnown RBP5.84□□□□□ -1.47
EPHA3-201ENST00000336596 GAGE12JA6NER3 117 aa5.84□□□□□ -1.48
EPHA3-201ENST00000336596 GAGE1Q13065 139 aa5.84□□□□□ -1.48
EPHA3-201ENST00000336596 GAGE4Q13068 117 aa5.84□□□□□ -1.48
EPHA3-201ENST00000336596 GAGE5Q13069 117 aa5.84□□□□□ -1.48
EPHA3-201ENST00000336596 GAGE13Q4V321 117 aa5.84□□□□□ -1.48
EPHA3-201ENST00000336596 KIR2DL5BQ8NHK3 375 aa5.84□□□□□ -1.48
EPHA3-201ENST00000336596 WDR87Q6ZQQ6 2873 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 RIPPLY3P57055 190 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 IGF2BP2-AS1Q96M15 143 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 SPG11Q96JI7 2443 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 IGKV2D-24A0A075B6R9 120 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 POU2AF1Q16633 256 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 C10orf55Q5SWW7 151 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 COL5A1-AS1Q5SY13 56 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 C1orf159Q96HA4 380 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 MRPL36Q9P0J6 103 aaKnown RBP5.83□□□□□ -1.48
EPHA3-201ENST00000336596 ZNF581Q9P0T4 197 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 CENPFP49454 3210 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 NOTCH2Q04721 2471 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 LRP4O75096 1905 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 ANKHD1Q8IWZ3 2542 aaKnown RBP5.83□□□□□ -1.48
EPHA3-201ENST00000336596 PAX2Q02962 417 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 LSM4Q9Y4Z0 139 aaKnown RBP5.83□□□□□ -1.48
EPHA3-201ENST00000336596 FREM1Q5H8C1 2179 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 IGHV4-31P0DP07 118 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 LHFPL1Q86WI0 220 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 HS3ST6Q96QI5 342 aa5.83□□□□□ -1.48
EPHA3-201ENST00000336596 A0A1B0GW64 132 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 NDUFA3O95167 84 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 HERVK_113P63121 156 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 Q86TA4 180 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 WDR86Q86TI4 376 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 MGST2Q99735 147 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 K7EMI3 77 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 INAFM2P0DMQ5 153 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 CBLN2Q8IUK8 224 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 CD300EQ496F6 205 aaPredicted RBP5.82□□□□□ -1.48
EPHA3-201ENST00000336596 NDUFAF3Q9BU61 184 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 TIMM21Q9BVV7 248 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 TIRAPP58753 221 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 SPINK13Q1W4C9 94 aa5.82□□□□□ -1.48
EPHA3-201ENST00000336596 INS-IGF2F8WCM5 200 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 SRP19P09132 144 aaKnown RBP5.81□□□□□ -1.48
EPHA3-201ENST00000336596 C16orf54Q6UWD8 224 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 Q6YL49 198 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 GPHB5Q86YW7 130 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 LINC01548A6NM66 108 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 G3V318 75 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 IGHV3-73A0A0B4J1V6 119 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 TRAV2A0A0B4J234 112 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 BTCP35070 178 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 RBMY1FQ15415 496 aaKnown RBP5.81□□□□□ -1.48
EPHA3-201ENST00000336596 ZNF503Q96F45 646 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 SNHG12Q9BXW3 62 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 MALRD1Q5VYJ5 2156 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 A0A1B0GWB2 263 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 LINC00473A8K010 186 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 PRSS46E5RG02 174 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 NCR2O95944 276 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 C18orf15Q96N68 181 aa5.81□□□□□ -1.48
EPHA3-201ENST00000336596 NDUFS7O75251 213 aa5.8□□□□□ -1.48
EPHA3-201ENST00000336596 SSBP2P81877 361 aaPredicted RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 DAZ2Q13117 558 aaKnown RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 KLF5Q13887 457 aaPredicted RBP5.8□□□□□ -1.48
EPHA3-201ENST00000336596 CEP350Q5VT06 3117 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms