RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TIMM8BQ9Y5J9 83 aaPredicted RBP9.75□□□□□ -0.85
LIMK1-201ENST00000336180 ZNF785A8K8V0 405 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 SERF1AO75920 110 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 TYMSP04818 313 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 SRIP30626 198 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 Q86TA4 180 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 MRPL52Q86TS9 123 aaKnown RBP9.75□□□□□ -0.85
LIMK1-201ENST00000336180 ZNF738Q8NE65 137 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 DAZAP1Q96EP5 407 aaKnown RBP9.75□□□□□ -0.85
LIMK1-201ENST00000336180 RCHY1Q96PM5 261 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 IGLV2-11P01706 119 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 CRISP2P16562 243 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 DEFB112Q30KQ8 113 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 FAM110DQ8TAY7 271 aaPredicted RBP9.75□□□□□ -0.85
LIMK1-201ENST00000336180 VGLL1Q99990 258 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 RABAC1Q9UI14 185 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 MOB4Q9Y3A3 225 aa9.75□□□□□ -0.85
LIMK1-201ENST00000336180 P01737 135 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 FAM19A2Q8N3H0 131 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 ZNF502Q8TBZ5 544 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 GTSF1Q8WW33 167 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 SMAD7O15105 426 aaKnown RBP9.74□□□□□ -0.85
LIMK1-201ENST00000336180 Q6ZQT7 251 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 TMEM136Q6ZRR5 245 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 OR1N2Q8NGR9 330 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 WNK1Q9H4A3 2382 aa9.74□□□□□ -0.85
LIMK1-201ENST00000336180 FASNP49327 2511 aaKnown RBP9.73□□□□□ -0.85
LIMK1-201ENST00000336180 MRPS12O15235 138 aaKnown RBP9.73□□□□□ -0.85
LIMK1-201ENST00000336180 SIVA1O15304 175 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 PMCHP20382 165 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 LINC00310P59036 64 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 SRSF8Q9BRL6 282 aaKnown RBP9.73□□□□□ -0.85
LIMK1-201ENST00000336180 SS18L2Q9UHA2 77 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 PAM16Q9Y3D7 125 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 RPL11P62913 178 aaKnown RBP9.73□□□□□ -0.85
LIMK1-201ENST00000336180 ZNF331Q9NQX6 463 aaPredicted RBP9.73□□□□□ -0.85
LIMK1-201ENST00000336180 PSG8Q9UQ74 426 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 COX11Q9Y6N1 276 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 YPEL3P61236 119 aaPredicted RBP9.73□□□□□ -0.85
LIMK1-201ENST00000336180 SMAGPQ0VAQ4 97 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 LY96Q9Y6Y9 160 aa9.73□□□□□ -0.85
LIMK1-201ENST00000336180 B4DSR2 109 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 NTF3P20783 257 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 PPIFP30405 207 aaKnown RBP9.72□□□□□ -0.85
LIMK1-201ENST00000336180 CRIP1P50238 77 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 BEX4Q9NWD9 120 aaPredicted RBP9.72□□□□□ -0.85
LIMK1-201ENST00000336180 RNF114Q9Y508 228 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 SMIM27A0A1W2PRY6 76 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 BMPR1BO00238 502 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 SPRY2O43597 315 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 LTAP01374 205 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 ATP5G2Q06055 141 aa9.72□□□□□ -0.85
LIMK1-201ENST00000336180 TRAV30A0A087WSZ9 112 aa9.71□□□□□ -0.85
LIMK1-201ENST00000336180 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.85
LIMK1-201ENST00000336180 DIRC3C9JPN6 131 aa9.71□□□□□ -0.85
LIMK1-201ENST00000336180 PMCHL1Q16048 86 aa9.71□□□□□ -0.85
LIMK1-201ENST00000336180 MLST8Q9BVC4 326 aa9.71□□□□□ -0.85
LIMK1-201ENST00000336180 RPP21Q9H633 154 aaKnown RBP9.71□□□□□ -0.85
LIMK1-201ENST00000336180 AAMDCQ9H7C9 122 aa9.71□□□□□ -0.85
LIMK1-201ENST00000336180 CKS1BP61024 79 aa9.71□□□□□ -0.86
LIMK1-201ENST00000336180 SPXQ9BT56 116 aa9.71□□□□□ -0.86
LIMK1-201ENST00000336180 CHEK1O14757 476 aa9.71□□□□□ -0.86
LIMK1-201ENST00000336180 ZNF253O75346 499 aa9.71□□□□□ -0.86
LIMK1-201ENST00000336180 ZNF138P52744 262 aa9.71□□□□□ -0.86
LIMK1-201ENST00000336180 GRAMD2BQ96HH9 432 aa9.71□□□□□ -0.86
LIMK1-201ENST00000336180 FMC1Q96HJ9 113 aa9.71□□□□□ -0.86
LIMK1-201ENST00000336180 CLPSL1A2RUU4 121 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 IZUMO1RA6ND01 250 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 APCSP02743 223 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 SAMD10Q9BYL1 202 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 TMEM14CQ9P0S9 112 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 EEF1AKMT3Q96AZ1 226 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 MBD6Q96DN6 1003 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 Q96MF0 132 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 GTSF1LQ9H1H1 148 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 KLF12Q9Y4X4 402 aa9.7□□□□□ -0.86
LIMK1-201ENST00000336180 NIPBLQ6KC79 2804 aaeCLIP9.7□□□□□ -0.86
LIMK1-201ENST00000336180 ARL3P36405 182 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 IGHG4P01861 327 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 CSN3P07498 182 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 ZNF80P51504 273 aaPredicted RBP9.69□□□□□ -0.86
LIMK1-201ENST00000336180 WFDC3Q8IUB2 231 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 TSKUQ8WUA8 353 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 GLMPQ8WWB7 406 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 TRBV9A0A0B4J1U6 114 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 ARMS2P0C7Q2 107 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 PSG3Q16557 428 aa9.69□□□□□ -0.86
LIMK1-201ENST00000336180 NOTCH3Q9UM47 2321 aa9.68□□□□□ -0.86
LIMK1-201ENST00000336180 RPL7P18124 248 aaKnown RBP9.68□□□□□ -0.86
LIMK1-201ENST00000336180 HINT1P49773 126 aaPredicted RBP9.68□□□□□ -0.86
LIMK1-201ENST00000336180 GCN1Q92616 2671 aaKnown RBP9.68□□□□□ -0.86
LIMK1-201ENST00000336180 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
LIMK1-201ENST00000336180 BUB3O43684 328 aa9.68□□□□□ -0.86
LIMK1-201ENST00000336180 AZU1P20160 251 aa9.68□□□□□ -0.86
LIMK1-201ENST00000336180 CSN1S1P47710 185 aa9.68□□□□□ -0.86
LIMK1-201ENST00000336180 TM4SF20Q53R12 229 aa9.68□□□□□ -0.86
LIMK1-201ENST00000336180 TMEM18Q96B42 140 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms