RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TCRAP04437 139 aa10.3□□□□□ -0.76
APOBEC3B-202ENST00000335760 SPINK13Q1W4C9 94 aa10.3□□□□□ -0.76
APOBEC3B-202ENST00000335760 SERTM2A0A1B0GWG4 89 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 C11orf94C9JXX5 98 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 K7EQM0 130 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 M0R2Z0 102 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 PEX7O00628 323 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 PMS2P11Q13670 270 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 DEFB135Q30KP9 77 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 CCDC28AQ8IWP9 274 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 LYPD6BQ8NI32 183 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 TM2D3Q9BRN9 247 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 ATG101Q9BSB4 218 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 C1QTNF4Q9BXJ3 329 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 RETNQ9HD89 108 aa10.29□□□□□ -0.76
APOBEC3B-202ENST00000335760 LEPP41159 167 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 ZNF138P52744 262 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 Q6ZWC4 215 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 CYB561D1Q8N8Q1 229 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 Q8TAT8 98 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 HIST1H2BAQ96A08 127 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 SGK494Q96LW2 274 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 RCHY1Q96PM5 261 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 ODF3Q96PU9 254 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 SPATA25Q9BR10 227 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 ZNF492Q9P255 531 aa10.28□□□□□ -0.76
APOBEC3B-202ENST00000335760 TRAV12-2A0A075B6T6 113 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 F6UZH7 168 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 J3KRW8 73 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 AMBPP02760 352 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 NHLRC4P0CG21 123 aaPredicted RBP10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 BCL2P10415 239 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 TSPOP30536 169 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 IFITM2Q01629 132 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 RNF183Q96D59 192 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 FAM19A4Q96LR4 140 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 LINC00479Q96M42 142 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 TCEAL7Q9BRU2 100 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 ZMAT4Q9H898 229 aa10.27□□□□□ -0.76
APOBEC3B-202ENST00000335760 TRAV34A0A0B4J273 112 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 CRXO43186 299 aaPredicted RBP10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 SPRY2O43597 315 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 NMBP08949 121 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 CDKN1BP46527 198 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 ZNF767PQ75MW2 155 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 TMEM75Q8N9X5 138 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 TXNDC17Q9BRA2 123 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 OVOL2Q9BRP0 275 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 VAX2Q9UIW0 290 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 LOC102723971A0A1B0GUV8 181 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 SCO2A0A1W2PP80 73 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 RBFOX3A6NFN3 312 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 INSP01308 110 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 TAGLN2P37802 199 aaKnown RBP10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 RAB14P61106 215 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 MEF2BQ02080 365 aaPredicted RBP10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 KIR3DS1Q14943 382 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 PRNTQ86SH4 94 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 IGF2BP2-AS1Q96M15 143 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 RARRES2Q99969 163 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 HUWE1Q7Z6Z7 4374 aaKnown RBP10.26□□□□□ -0.77
APOBEC3B-202ENST00000335760 IGLV2-11P01706 119 aa10.25□□□□□ -0.77
APOBEC3B-202ENST00000335760 CRISP2P16562 243 aa10.25□□□□□ -0.77
APOBEC3B-202ENST00000335760 AKR1C3P42330 323 aa10.25□□□□□ -0.77
APOBEC3B-202ENST00000335760 FLI1Q01543 452 aaPredicted RBP10.25□□□□□ -0.77
APOBEC3B-202ENST00000335760 LENEPQ9Y5L5 61 aa10.25□□□□□ -0.77
APOBEC3B-202ENST00000335760 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 FBLL1A6NHQ2 334 aaKnown RBP10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 PDE6DO43924 150 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 GPX1P07203 203 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 GFI1BQ5VTD9 330 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 C1orf158Q8N1D5 194 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 ZFAND2AQ8N6M9 145 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 OR11H2Q8NH07 326 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 TVP23CQ96ET8 276 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 TREM1Q9NP99 234 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 GOLT1BQ9Y3E0 138 aa10.24□□□□□ -0.77
APOBEC3B-202ENST00000335760 TRAV12-3A0A0B4J271 114 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 C7orf71A4D174 169 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 KLLNB2CW77 178 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 UBE2G1P62253 170 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 BTN1A1Q13410 526 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 TOR2AQ5JU69 321 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 ZNF506Q5JVG8 444 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 PRR9Q5T870 116 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 C2CD4CQ8TF44 421 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 C11orf52Q96A22 123 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 FMC1Q96HJ9 113 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 FAM210AQ96ND0 272 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 TMEM208Q9BTX3 173 aa10.23□□□□□ -0.77
APOBEC3B-202ENST00000335760 EIF5A2Q9GZV4 153 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms