RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PSG9Q00887 426 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 ZNF562Q6V9R5 426 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 C12orf54Q6X4T0 127 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 VMO1Q7Z5L0 202 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 C18orf15Q96N68 181 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 PIEZO1Q92508 2521 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 FGF6P10767 208 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 CKS2P33552 79 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 CEACAM3P40198 252 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 PDE6HQ13956 83 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 PRSS57Q6UWY2 283 aa9.57□□□□□ -0.88
VPS33B-201ENST00000333371 TRAV30A0A087WSZ9 112 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 IGHV3-49A0A0A0MS15 119 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 ORM1P02763 201 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 Q6AWC8 147 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 FER1L6-AS1Q8NA97 138 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 UBTD1Q9HAC8 227 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 A0A1B0GW15 77 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
VPS33B-201ENST00000333371 PRTN3P24158 256 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 ZFP36P26651 326 aaKnown RBP9.56□□□□□ -0.88
VPS33B-201ENST00000333371 RABAC1Q9UI14 185 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 U3KQK5 164 aa9.56□□□□□ -0.88
VPS33B-201ENST00000333371 K7EP13 123 aa9.55□□□□□ -0.88
VPS33B-201ENST00000333371 EVI2AP22794 236 aa9.55□□□□□ -0.88
VPS33B-201ENST00000333371 TTC9CQ8N5M4 171 aa9.55□□□□□ -0.88
VPS33B-201ENST00000333371 DKK2Q9UBU2 259 aa9.55□□□□□ -0.88
VPS33B-201ENST00000333371 IGHV7-81A0A0B4J1V7 117 aa9.55□□□□□ -0.88
VPS33B-201ENST00000333371 RPL7P18124 248 aaKnown RBP9.55□□□□□ -0.88
VPS33B-201ENST00000333371 ECSCRQ19T08 205 aa9.55□□□□□ -0.88
VPS33B-201ENST00000333371 DTX2Q86UW9 622 aa9.55□□□□□ -0.88
VPS33B-201ENST00000333371 TMEM11P17152 192 aa9.54□□□□□ -0.88
VPS33B-201ENST00000333371 PAX8Q06710 450 aa9.54□□□□□ -0.88
VPS33B-201ENST00000333371 Q6ZQT7 251 aa9.54□□□□□ -0.88
VPS33B-201ENST00000333371 PCP2Q8IVA1 136 aa9.54□□□□□ -0.88
VPS33B-201ENST00000333371 THYN1Q9P016 225 aa9.54□□□□□ -0.88
VPS33B-201ENST00000333371 C7orf71A4D174 169 aa9.54□□□□□ -0.88
VPS33B-201ENST00000333371 ZNF207O43670 478 aaKnown RBP9.54□□□□□ -0.88
VPS33B-201ENST00000333371 HBDP02042 147 aa9.54□□□□□ -0.88
VPS33B-201ENST00000333371 GNLYP22749 145 aa9.54□□□□□ -0.88
VPS33B-201ENST00000333371 LINC01548A6NM66 108 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 CD5LO43866 347 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 TMEM97Q5BJF2 176 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 SAPCD1Q5SSQ6 148 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 TTTY13Q9BZ97 58 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 M0R1W7 72 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 NMUP48645 174 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 C15orf32Q32M92 178 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 TM4SF20Q53R12 229 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 IL17RELQ6ZVW7 336 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 Q8N6K4 173 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 ITPR1Q14643 2758 aa9.53□□□□□ -0.88
VPS33B-201ENST00000333371 A0A1W2PPR1 153 aa9.52□□□□□ -0.88
VPS33B-201ENST00000333371 ITLN2Q8WWU7 325 aaPredicted RBP9.52□□□□□ -0.88
VPS33B-201ENST00000333371 G3V318 75 aa9.52□□□□□ -0.89
VPS33B-201ENST00000333371 CLEC3BP05452 202 aa9.52□□□□□ -0.89
VPS33B-201ENST00000333371 Q8N9W7 124 aa9.52□□□□□ -0.89
VPS33B-201ENST00000333371 ZNF48Q96MX3 618 aaPredicted RBP9.52□□□□□ -0.89
VPS33B-201ENST00000333371 PSMG3-AS1Q96PY0 264 aa9.52□□□□□ -0.89
VPS33B-201ENST00000333371 LGALS9BQ3B8N2 356 aa9.52□□□□□ -0.89
VPS33B-201ENST00000333371 LGALS9CQ6DKI2 356 aa9.52□□□□□ -0.89
VPS33B-201ENST00000333371 CST9LQ9H4G1 147 aa9.52□□□□□ -0.89
VPS33B-201ENST00000333371 PKD1L2Q7Z442 2459 aa9.51□□□□□ -0.89
VPS33B-201ENST00000333371 RAB37Q96AX2 223 aa9.51□□□□□ -0.89
VPS33B-201ENST00000333371 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
VPS33B-201ENST00000333371 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
VPS33B-201ENST00000333371 ABCA2Q9BZC7 2435 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 ATP6V0E1O15342 81 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 TRGV3P03979 118 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 CLEC19AQ6UXS0 136 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 S100A7AQ86SG5 101 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 BOD1L2Q8IYS8 172 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 CRYBG3Q68DQ2 2970 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 AGRNO00468 2067 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 IGKV2D-26A0A0A0MRZ7 120 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 SMAD7O15105 426 aaKnown RBP9.5□□□□□ -0.89
VPS33B-201ENST00000333371 BMI1P35226 326 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 LEPP41159 167 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 COX8CQ7Z4L0 72 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 ZFAND3Q9H8U3 227 aa9.5□□□□□ -0.89
VPS33B-201ENST00000333371 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 GAGE12BA1L429 117 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 SPRY2O43597 315 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 CDKN1BP46527 198 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 LINC00527Q9UJ94 153 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 CELSR2Q9HCU4 2923 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 SPG11Q96JI7 2443 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 IGKV3D-20A0A0C4DH25 116 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 FABP5P3A8MUU1 101 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 H3BUT2 72 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 C19orf84I3L1E1 186 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 BUB3O43684 328 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 TNFRSF6BO95407 300 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 EFNA4P52798 201 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 CCDC144NLQ6NUI1 221 aa9.49□□□□□ -0.89
VPS33B-201ENST00000333371 ZNF502Q8TBZ5 544 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms