RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 ERCC8Q13216 396 aa11.81□□□□□ -0.52
C11orf88-201ENST00000332814 PHLDA1Q8WV24 401 aaPredicted RBP11.81□□□□□ -0.52
C11orf88-201ENST00000332814 TMEM167BQ9NRX6 74 aa11.81□□□□□ -0.52
C11orf88-201ENST00000332814 RPH3ALQ9UNE2 315 aa11.81□□□□□ -0.52
C11orf88-201ENST00000332814 CTXND1A0A1B0GTU2 59 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 PGPA6NDG6 321 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 SPART-AS1P0CW21 52 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 HTN1P15515 57 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 CEMP1Q6PRD7 247 aaPredicted RBP11.8□□□□□ -0.52
C11orf88-201ENST00000332814 C9orf47Q6ZRZ4 202 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 AKAP14Q86UN6 197 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 TCTE3Q8IZS6 198 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 ST6GAL2Q96JF0 529 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 NIPSNAP3BQ9BS92 247 aa11.8□□□□□ -0.52
C11orf88-201ENST00000332814 ZNF705GA8MUZ8 300 aaPredicted RBP11.79□□□□□ -0.52
C11orf88-201ENST00000332814 H7BYZ3 331 aa11.79□□□□□ -0.52
C11orf88-201ENST00000332814 TAS2R60P59551 318 aa11.79□□□□□ -0.52
C11orf88-201ENST00000332814 GFI1BQ5VTD9 330 aa11.79□□□□□ -0.52
C11orf88-201ENST00000332814 AGPAT4-IT1Q9H0P7 198 aa11.79□□□□□ -0.52
C11orf88-201ENST00000332814 RBAKDNA6NC62 111 aa11.78□□□□□ -0.52
C11orf88-201ENST00000332814 C11orf94C9JXX5 98 aa11.78□□□□□ -0.52
C11orf88-201ENST00000332814 SLC25A5P05141 298 aaKnown RBP11.78□□□□□ -0.52
C11orf88-201ENST00000332814 GPX1P07203 203 aa11.78□□□□□ -0.52
C11orf88-201ENST00000332814 ZNF138P52744 262 aa11.78□□□□□ -0.52
C11orf88-201ENST00000332814 TMUB2Q71RG4 321 aa11.78□□□□□ -0.52
C11orf88-201ENST00000332814 CCDC28AQ8IWP9 274 aa11.78□□□□□ -0.52
C11orf88-201ENST00000332814 CELA1Q9UNI1 258 aa11.78□□□□□ -0.52
C11orf88-201ENST00000332814 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
C11orf88-201ENST00000332814 TRAV12-3A0A0B4J271 114 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 C7orf71A4D174 169 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 DIRC3C9JPN6 131 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.53
C11orf88-201ENST00000332814 KIR3DS1Q14943 382 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 FAM222AQ5U5X8 452 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 Q8TAT8 98 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 STOML3Q8TAV4 291 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 C16orf74Q96GX8 76 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 VGLL1Q99990 258 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 ZNF492Q9P255 531 aa11.77□□□□□ -0.53
C11orf88-201ENST00000332814 TRAV10A0A0B4J240 114 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 MAP1LC3B2A6NCE7 125 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 K7EQM0 130 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 C1QBP02746 253 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 Q6ZTC4 211 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 ZNF767PQ75MW2 155 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 SSX7Q7RTT5 188 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 MAP1LC3BQ9GZQ8 125 aa11.76□□□□□ -0.53
C11orf88-201ENST00000332814 UMAD1C9J7I0 102 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 NMBP08949 121 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 CRISP2P16562 243 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 RNASE4P34096 147 aaKnown RBP11.75□□□□□ -0.53
C11orf88-201ENST00000332814 ZNF726P1Q15940 193 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 ZNF493Q6ZR52 646 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 GOLT1AQ6ZVE7 132 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 ARL6IP6Q8N6S5 226 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 C5orf17Q8NAS9 161 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 DKK2Q9UBU2 259 aa11.75□□□□□ -0.53
C11orf88-201ENST00000332814 TRBV7-9A0A0J9YWB2 115 aa11.74□□□□□ -0.53
C11orf88-201ENST00000332814 SERTM2A0A1B0GWG4 89 aa11.74□□□□□ -0.53
C11orf88-201ENST00000332814 KLLNB2CW77 178 aa11.74□□□□□ -0.53
C11orf88-201ENST00000332814 FGF8P55075 233 aaPredicted RBP11.74□□□□□ -0.53
C11orf88-201ENST00000332814 GNG5P63218 68 aa11.74□□□□□ -0.53
C11orf88-201ENST00000332814 BTN1A1Q13410 526 aa11.74□□□□□ -0.53
C11orf88-201ENST00000332814 C12orf74Q32Q52 190 aa11.74□□□□□ -0.53
C11orf88-201ENST00000332814 TMEM263Q8WUH6 116 aaKnown RBP11.74□□□□□ -0.53
C11orf88-201ENST00000332814 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
C11orf88-201ENST00000332814 PYGO2Q9BRQ0 406 aa11.74□□□□□ -0.53
C11orf88-201ENST00000332814 LYRM9A8MSI8 78 aa11.73□□□□□ -0.53
C11orf88-201ENST00000332814 PRM2P04554 102 aa11.73□□□□□ -0.53
C11orf88-201ENST00000332814 DAD1P61803 113 aa11.73□□□□□ -0.53
C11orf88-201ENST00000332814 SUMO1P63165 101 aaKnown RBP11.73□□□□□ -0.53
C11orf88-201ENST00000332814 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
C11orf88-201ENST00000332814 FAM213BQ8TBF2 198 aa11.73□□□□□ -0.53
C11orf88-201ENST00000332814 SUN5Q8TC36 379 aa11.73□□□□□ -0.53
C11orf88-201ENST00000332814 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
C11orf88-201ENST00000332814 LENEPQ9Y5L5 61 aa11.73□□□□□ -0.53
C11orf88-201ENST00000332814 DEFB131BA0A096LNP1 70 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 LCE6AA0A183 80 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 A0A1W2PRE2 83 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 SNURFLB1AK76 121 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 RGS13O14921 159 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 IFNA7P01567 189 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 AZU1P20160 251 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 UBE2G2P60604 165 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 CD300CQ08708 224 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 TMED6Q8WW62 240 aa11.72□□□□□ -0.53
C11orf88-201ENST00000332814 CBY3A6NI87 242 aa11.71□□□□□ -0.53
C11orf88-201ENST00000332814 IGLL5B9A064 214 aa11.71□□□□□ -0.53
C11orf88-201ENST00000332814 TCRAP04437 139 aa11.71□□□□□ -0.53
C11orf88-201ENST00000332814 LGALSLQ3ZCW2 172 aaPredicted RBP11.71□□□□□ -0.53
C11orf88-201ENST00000332814 ZFP69Q49AA0 526 aa11.71□□□□□ -0.53
C11orf88-201ENST00000332814 ZFAND2AQ8N6M9 145 aa11.71□□□□□ -0.53
C11orf88-201ENST00000332814 RNASE8Q8TDE3 154 aaKnown RBP11.71□□□□□ -0.53
C11orf88-201ENST00000332814 NKX6-2Q9C056 277 aaPredicted RBP11.71□□□□□ -0.53
C11orf88-201ENST00000332814 TMPRSS5Q9H3S3 457 aa11.71□□□□□ -0.53
C11orf88-201ENST00000332814 TIMM8BQ9Y5J9 83 aaPredicted RBP11.71□□□□□ -0.53
C11orf88-201ENST00000332814 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms