RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 ZNF664Q8N3J9 261 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 TEX22C9J3V5 150 aa13.27□□□□□ -0.28
PTCH1-201ENST00000331920 F6UB75 175 aa13.27□□□□□ -0.28
PTCH1-201ENST00000331920 IGKV1D-8A0A087WSZ0 117 aa13.27□□□□□ -0.28
PTCH1-201ENST00000331920 WIPF2Q8TF74 440 aaPredicted RBP13.27□□□□□ -0.28
PTCH1-201ENST00000331920 E9PLN8 166 aa13.27□□□□□ -0.28
PTCH1-201ENST00000331920 BAALC-AS2P0C853 105 aa13.27□□□□□ -0.28
PTCH1-201ENST00000331920 A0A1B0GUS0 222 aa13.27□□□□□ -0.29
PTCH1-201ENST00000331920 M0R1W7 72 aa13.27□□□□□ -0.29
PTCH1-201ENST00000331920 C9orf47Q6ZRZ4 202 aa13.27□□□□□ -0.29
PTCH1-201ENST00000331920 A0A1B0GX51 115 aa13.27□□□□□ -0.29
PTCH1-201ENST00000331920 WDR83OSQ9Y284 106 aa13.27□□□□□ -0.29
PTCH1-201ENST00000331920 IGKV3D-7A0A0C4DH55 119 aa13.27□□□□□ -0.29
PTCH1-201ENST00000331920 Q96MF0 132 aa13.27□□□□□ -0.29
PTCH1-201ENST00000331920 SPTAN1Q13813 2472 aaKnown RBP13.26□□□□□ -0.29
PTCH1-201ENST00000331920 H0YIZ8 118 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 SEM1Q6ZVN7 128 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 C5orf24Q7Z6I8 188 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 TET1Q8NFU7 2136 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 COX7B2Q8TF08 81 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 ASPHD1Q5U4P2 390 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 IGHV1OR15-1A0A075B7D0 117 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 A0A1B0GTI1 187 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 IGKV4-1P06312 121 aa13.26□□□□□ -0.29
PTCH1-201ENST00000331920 H0Y9J4 135 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 NOP10Q9NPE3 64 aaKnown RBP13.25□□□□□ -0.29
PTCH1-201ENST00000331920 USF3Q68DE3 2245 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 PINLYPA6NC86 204 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 MPZP25189 248 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 HS3ST6Q96QI5 342 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 SDHAF1A6NFY7 115 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 UBE2AP49459 152 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 MST1LQ2TV78 715 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 CD177Q8N6Q3 437 aa13.25□□□□□ -0.29
PTCH1-201ENST00000331920 IGLV10-54A0A075B6I4 117 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 Q86TA4 180 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 IGFBPL1Q8WX77 278 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 MRPL27Q9P0M9 148 aaKnown RBP13.24□□□□□ -0.29
PTCH1-201ENST00000331920 LYPD2Q6UXB3 125 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 ZNRD1Q9P1U0 126 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 IGKV1-9A0A0C4DH69 117 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 C20orf204Q6ZNR8 217 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 POU2AF1Q16633 256 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 MRPL14Q6P1L8 145 aaKnown RBP13.24□□□□□ -0.29
PTCH1-201ENST00000331920 TRBV24-1A0A075B6N3 115 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 LY6G6FQ5SQ64 297 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 OR11H6Q8NGC7 330 aa13.24□□□□□ -0.29
PTCH1-201ENST00000331920 PAQR4Q8N4S7 273 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-201ENST00000331920 MUC4Q99102 2169 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 COL8A2P25067 703 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 FBLN5Q9UBX5 448 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 COLCA2A8K830 154 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 MUSTN1Q8IVN3 82 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 WIPF3A6NGB9 483 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 K7EP13 123 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 TMEM75Q8N9X5 138 aa13.23□□□□□ -0.29
PTCH1-201ENST00000331920 A0A0G2JNJ9 132 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 HERVK_113P63121 156 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 Q9UFV3 132 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 FOXE3Q13461 319 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 CASC2Q6XLA1 102 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 ROS1P08922 2347 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 TEX36Q5VZQ5 186 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-201ENST00000331920 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-201ENST00000331920 LAIR2Q6ISS4 152 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 LYPD1Q8N2G4 141 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 ATP6V0E1O15342 81 aa13.22□□□□□ -0.29
PTCH1-201ENST00000331920 MED12LQ86YW9 2145 aa13.21□□□□□ -0.29
PTCH1-201ENST00000331920 A0A1W2PPM0 123 aa13.21□□□□□ -0.29
PTCH1-201ENST00000331920 AMTNQ6UX39 209 aa13.21□□□□□ -0.29
PTCH1-201ENST00000331920 VSIG2Q96IQ7 327 aa13.21□□□□□ -0.29
PTCH1-201ENST00000331920 MRPL51Q4U2R6 128 aaKnown RBP13.21□□□□□ -0.29
PTCH1-201ENST00000331920 LRP5O75197 1615 aa13.21□□□□□ -0.3
PTCH1-201ENST00000331920 LINC00473A8K010 186 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 WISP3O95389 354 aaPredicted RBP13.2□□□□□ -0.3
PTCH1-201ENST00000331920 IGLC2P0DOY2 106 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 IGLC3P0DOY3 106 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 NMSQ5H8A3 153 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 POLR3KQ9Y2Y1 108 aaPredicted RBP13.2□□□□□ -0.3
PTCH1-201ENST00000331920 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
PTCH1-201ENST00000331920 PFN1P07737 140 aaKnown RBP13.2□□□□□ -0.3
PTCH1-201ENST00000331920 CDKN1BP46527 198 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 Q8N8P6 123 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 SBF1O95248 1867 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 IGKV1-16P04430 117 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 PYY3Q5JQD4 70 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 MPLKIPQ8TAP9 179 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 BTCP35070 178 aa13.2□□□□□ -0.3
PTCH1-201ENST00000331920 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
PTCH1-201ENST00000331920 PSMB8P28062 276 aa13.19□□□□□ -0.3
PTCH1-201ENST00000331920 C8orf86Q6ZUL3 223 aa13.19□□□□□ -0.3
PTCH1-201ENST00000331920 C5orf38Q86SI9 138 aa13.19□□□□□ -0.3
PTCH1-201ENST00000331920 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
PTCH1-201ENST00000331920 IGHV3-30P01768 117 aa13.19□□□□□ -0.3
PTCH1-201ENST00000331920 IGHV3-33P01772 117 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms