RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CEND1Q8N111 149 aa14.33□□□□□ -0.11
PKP3-201ENST00000331563 C1orf162Q8NEQ5 155 aaPredicted RBP14.33□□□□□ -0.11
PKP3-201ENST00000331563 A0A1W2PPI3 338 aa14.33□□□□□ -0.12
PKP3-201ENST00000331563 J3KRW8 73 aa14.33□□□□□ -0.12
PKP3-201ENST00000331563 MRPL51Q4U2R6 128 aaKnown RBP14.33□□□□□ -0.12
PKP3-201ENST00000331563 OR4C13Q8NGP0 309 aa14.33□□□□□ -0.12
PKP3-201ENST00000331563 TMEM167AQ8TBQ9 72 aa14.33□□□□□ -0.12
PKP3-201ENST00000331563 TRGV9Q99603 122 aa14.33□□□□□ -0.12
PKP3-201ENST00000331563 ZNF785A8K8V0 405 aa14.33□□□□□ -0.12
PKP3-201ENST00000331563 ODF1Q14990 250 aa14.33□□□□□ -0.12
PKP3-201ENST00000331563 ATP6V0E2Q8NHE4 81 aa14.33□□□□□ -0.12
PKP3-201ENST00000331563 SPTAN1Q13813 2472 aaKnown RBP14.32□□□□□ -0.12
PKP3-201ENST00000331563 NPYP01303 97 aa14.32□□□□□ -0.12
PKP3-201ENST00000331563 C16orf97H3BN30 126 aa14.32□□□□□ -0.12
PKP3-201ENST00000331563 ARL3P36405 182 aa14.32□□□□□ -0.12
PKP3-201ENST00000331563 ZFAND6Q6FIF0 208 aa14.32□□□□□ -0.12
PKP3-201ENST00000331563 FAM57AQ8TBR7 257 aa14.32□□□□□ -0.12
PKP3-201ENST00000331563 ENSAO43768 121 aaKnown RBP14.31□□□□□ -0.12
PKP3-201ENST00000331563 GATD1Q8NB37 220 aa14.31□□□□□ -0.12
PKP3-201ENST00000331563 RAX2Q96IS3 184 aa14.31□□□□□ -0.12
PKP3-201ENST00000331563 TPSG1Q9NRR2 321 aa14.31□□□□□ -0.12
PKP3-201ENST00000331563 A0A0G2JNJ9 132 aa14.31□□□□□ -0.12
PKP3-201ENST00000331563 PRSS29PA6NIE9 313 aa14.31□□□□□ -0.12
PKP3-201ENST00000331563 CRIP1P50238 77 aa14.31□□□□□ -0.12
PKP3-201ENST00000331563 GFRALQ6UXV0 394 aa14.31□□□□□ -0.12
PKP3-201ENST00000331563 Q9UFV3 132 aa14.31□□□□□ -0.12
PKP3-201ENST00000331563 FAM90A27PA6NNH2 459 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 INS-IGF2F8WCM5 200 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 TWIST1Q15672 202 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 ZNF493Q6ZR52 646 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 ZNF833PQ6ZTB9 187 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 GLMPQ8WWB7 406 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 C17orf77Q96MU5 243 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 SRSF8Q9BRL6 282 aaKnown RBP14.3□□□□□ -0.12
PKP3-201ENST00000331563 IGKCP01834 107 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 ZC2HC1BQ5TFG8 222 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 NFE4Q86UQ8 179 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 TEX29Q8N6K0 151 aa14.3□□□□□ -0.12
PKP3-201ENST00000331563 SLC25A39Q9BZJ4 359 aaPredicted RBP14.3□□□□□ -0.12
PKP3-201ENST00000331563 WI2-2373I1.2A0A1W2PRP0 233 aa14.29□□□□□ -0.12
PKP3-201ENST00000331563 LEPP41159 167 aa14.29□□□□□ -0.12
PKP3-201ENST00000331563 DIAPH2-AS1Q14236 149 aa14.29□□□□□ -0.12
PKP3-201ENST00000331563 C8orf49Q96NF6 230 aa14.29□□□□□ -0.12
PKP3-201ENST00000331563 NHLRC4P0CG21 123 aaPredicted RBP14.29□□□□□ -0.12
PKP3-201ENST00000331563 ZNF562Q6V9R5 426 aa14.29□□□□□ -0.12
PKP3-201ENST00000331563 FOXC2Q99958 501 aa14.29□□□□□ -0.12
PKP3-201ENST00000331563 TMEM160Q9NX00 188 aa14.29□□□□□ -0.12
PKP3-201ENST00000331563 RAXQ9Y2V3 346 aa14.29□□□□□ -0.12
PKP3-201ENST00000331563 RBP4P02753 201 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 C12orf74Q32Q52 190 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 HIST1H4GQ99525 98 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 RNF7Q9UBF6 113 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 U3KQK5 164 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 NPIPB5A8MRT5 1133 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 PRRG2O14669 202 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 LHBP01229 141 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 VMA21Q3ZAQ7 101 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 PIFOQ8TCI5 191 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 GAFA1Q96PS6 74 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 HHLA3Q9XRX5 114 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 DSCAML1Q8TD84 2053 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 TMEM75Q8N9X5 138 aa14.28□□□□□ -0.12
PKP3-201ENST00000331563 K7ENP7 123 aa14.27□□□□□ -0.12
PKP3-201ENST00000331563 M0R3E3 92 aa14.27□□□□□ -0.12
PKP3-201ENST00000331563 CCL3L1P16619 93 aa14.27□□□□□ -0.12
PKP3-201ENST00000331563 AKAP6Q13023 2319 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 IGHV3-72A0A0B4J1Y9 119 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 GAGE12JA6NER3 117 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 GAGE7O76087 117 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 GAGE12FP0CL80 117 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 GAGE12GP0CL81 117 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 GAGE12IP0CL82 117 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 GAGE4Q13068 117 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 RRN3P1Q2M238 152 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 FAM169BQ8N8A8 192 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 CSMD1Q96PZ7 3565 aa14.27□□□□□ -0.13
PKP3-201ENST00000331563 SRSF1Q07955 248 aaKnown RBP eCLIP14.26□□□□□ -0.13
PKP3-201ENST00000331563 KLF17Q5JT82 389 aaPredicted RBP14.26□□□□□ -0.13
PKP3-201ENST00000331563 TMEM133Q9H2Q1 129 aa14.26□□□□□ -0.13
PKP3-201ENST00000331563 MAP1LC3AQ9H492 121 aa14.26□□□□□ -0.13
PKP3-201ENST00000331563 ANKHD1Q8IWZ3 2542 aaKnown RBP14.26□□□□□ -0.13
PKP3-201ENST00000331563 PAX8Q06710 450 aa14.26□□□□□ -0.13
PKP3-201ENST00000331563 PSMG4Q5JS54 123 aa14.26□□□□□ -0.13
PKP3-201ENST00000331563 TMEM8BA6NDV4 472 aa14.25□□□□□ -0.13
PKP3-201ENST00000331563 DPM2O94777 84 aa14.25□□□□□ -0.13
PKP3-201ENST00000331563 CFAP126Q5VTH2 177 aa14.25□□□□□ -0.13
PKP3-201ENST00000331563 NGBQ9NPG2 151 aa14.25□□□□□ -0.13
PKP3-201ENST00000331563 AGRNO00468 2067 aa14.25□□□□□ -0.13
PKP3-201ENST00000331563 RITA1Q96K30 269 aa14.25□□□□□ -0.13
PKP3-201ENST00000331563 HOXB4P17483 251 aaPredicted RBP14.24□□□□□ -0.13
PKP3-201ENST00000331563 SMCPP49901 116 aaPredicted RBP14.24□□□□□ -0.13
PKP3-201ENST00000331563 ANXA2RQ3ZCQ2 193 aa14.24□□□□□ -0.13
PKP3-201ENST00000331563 RASL11BQ9BPW5 248 aa14.24□□□□□ -0.13
PKP3-201ENST00000331563 TRBV19A0A075B6N1 114 aa14.24□□□□□ -0.13
PKP3-201ENST00000331563 EVI2AP22794 236 aa14.24□□□□□ -0.13
PKP3-201ENST00000331563 TMEM14CQ9P0S9 112 aa14.24□□□□□ -0.13
PKP3-201ENST00000331563 TRAV40A0A0B4J280 105 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 SH2D1AO60880 128 aa14.23□□□□□ -0.13
PKP3-201ENST00000331563 RPL27AP46776 148 aaKnown RBP14.23□□□□□ -0.13
PKP3-201ENST00000331563 TNFAIP6P98066 277 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms