RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 A0A1W2PS18 150 aa12.89□□□□□ -0.35
DDX41-201ENST00000330503 C12orf57Q99622 126 aa12.89□□□□□ -0.35
DDX41-201ENST00000330503 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
DDX41-201ENST00000330503 SOCS3O14543 225 aa12.89□□□□□ -0.35
DDX41-201ENST00000330503 SH2D1AO60880 128 aa12.89□□□□□ -0.35
DDX41-201ENST00000330503 ZNF80P51504 273 aaPredicted RBP12.89□□□□□ -0.35
DDX41-201ENST00000330503 FOXA3P55318 350 aaPredicted RBP12.89□□□□□ -0.35
DDX41-201ENST00000330503 RBPMS2Q6ZRY4 209 aaKnown RBP12.89□□□□□ -0.35
DDX41-201ENST00000330503 C16orf92Q96LL3 132 aa12.89□□□□□ -0.35
DDX41-201ENST00000330503 AGPAT4-IT1Q9H0P7 198 aa12.89□□□□□ -0.35
DDX41-201ENST00000330503 GRIFINA4D1Z8 144 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 HLA-DQA1P01909 254 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 KIAA1644Q3SXP7 199 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 ATP5L2Q7Z4Y8 100 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 HIST1H2BLQ99880 126 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 TP53TG3Q9ULZ0 132 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 LGALS1P09382 135 aaKnown RBP12.88□□□□□ -0.35
DDX41-201ENST00000330503 CT45A10P0DMU9 189 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 FAM162BQ5T6X4 162 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 TMEM256Q8N2U0 113 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 UBE2E2Q96LR5 201 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 YAE1D1Q9NRH1 226 aa12.88□□□□□ -0.35
DDX41-201ENST00000330503 SONP18583 2426 aaKnown RBP12.87□□□□□ -0.35
DDX41-201ENST00000330503 NUPR1O60356 82 aa12.87□□□□□ -0.35
DDX41-201ENST00000330503 FABP4P15090 132 aa12.87□□□□□ -0.35
DDX41-201ENST00000330503 OR10D4PQ8NGN7 298 aa12.87□□□□□ -0.35
DDX41-201ENST00000330503 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
DDX41-201ENST00000330503 SELENOKQ9Y6D0 94 aa12.87□□□□□ -0.35
DDX41-201ENST00000330503 ANK3Q12955 4377 aaKnown RBP12.87□□□□□ -0.35
DDX41-201ENST00000330503 APCSP02743 223 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 S100A2P29034 98 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 CAMPP49913 170 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 SLAQ13239 276 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 ZNF575Q86XF7 245 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 DNAJC9-AS1A6NH13 148 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 AMBPP02760 352 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 CRISP2P16562 243 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 ESM1Q9NQ30 184 aa12.86□□□□□ -0.35
DDX41-201ENST00000330503 FAM181BA6NEQ2 426 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 SMIM6P0DI80 62 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 NRN1Q9NPD7 142 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 UFC1Q9Y3C8 167 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 IGHV4OR15-8A0A075B7B6 117 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 A0A087WW49 117 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 A8MWP6 167 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 LINC00310P59036 64 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 Q0VG73 95 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 SSBP4Q9BWG4 385 aaPredicted RBP12.85□□□□□ -0.35
DDX41-201ENST00000330503 ACANP16112 2415 aa12.85□□□□□ -0.35
DDX41-201ENST00000330503 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 TMEM189A5PLL7 270 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 F2Z2F3 143 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 RPL11P62913 178 aaKnown RBP12.84□□□□□ -0.35
DDX41-201ENST00000330503 HBBP68871 147 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 PRR31Q5SQ13 230 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 Q6ZSV7 163 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 C18orf65Q6ZTR6 163 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 KLHDC1Q8N7A1 406 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 NDFIP1Q9BT67 221 aa12.84□□□□□ -0.35
DDX41-201ENST00000330503 HAX1O00165 279 aa12.83□□□□□ -0.35
DDX41-201ENST00000330503 ZNF138P52744 262 aa12.83□□□□□ -0.35
DDX41-201ENST00000330503 TCTEX1D4Q5JR98 221 aa12.83□□□□□ -0.35
DDX41-201ENST00000330503 TMSB15BA0A087X1C1 80 aa12.83□□□□□ -0.36
DDX41-201ENST00000330503 ZNF705DP0CH99 300 aaPredicted RBP12.83□□□□□ -0.36
DDX41-201ENST00000330503 ZNF705BP0CI00 300 aaPredicted RBP12.83□□□□□ -0.36
DDX41-201ENST00000330503 BMI1P35226 326 aa12.83□□□□□ -0.36
DDX41-201ENST00000330503 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
DDX41-201ENST00000330503 PPP1R14DQ9NXH3 145 aa12.83□□□□□ -0.36
DDX41-201ENST00000330503 IGKV3-7A0A075B6H7 116 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 SRD5A1P18405 259 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 SRIP30626 198 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 PYY3Q5JQD4 70 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 TMEM78Q5T7P6 136 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 REC114Q7Z4M0 266 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 PACRGQ96M98 296 aaPredicted RBP12.82□□□□□ -0.36
DDX41-201ENST00000330503 FASNP49327 2511 aaKnown RBP12.82□□□□□ -0.36
DDX41-201ENST00000330503 FABP5P3A8MUU1 101 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 ARMS2P0C7Q2 107 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 SYNJ2BPP57105 145 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 DEFB1P60022 68 aa12.82□□□□□ -0.36
DDX41-201ENST00000330503 HECTD1Q9ULT8 2610 aa12.81□□□□□ -0.36
DDX41-201ENST00000330503 LGALS9O00182 355 aa12.81□□□□□ -0.36
DDX41-201ENST00000330503 HOXD3P31249 432 aaPredicted RBP12.81□□□□□ -0.36
DDX41-201ENST00000330503 A0A1B0GUT8 65 aa12.8□□□□□ -0.36
DDX41-201ENST00000330503 SRSF2Q01130 221 aaKnown RBP12.8□□□□□ -0.36
DDX41-201ENST00000330503 OVOL1O14753 267 aa12.8□□□□□ -0.36
DDX41-201ENST00000330503 SERF1AO75920 110 aa12.8□□□□□ -0.36
DDX41-201ENST00000330503 ESDP10768 282 aa12.8□□□□□ -0.36
DDX41-201ENST00000330503 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
DDX41-201ENST00000330503 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
DDX41-201ENST00000330503 KLF5Q13887 457 aaPredicted RBP12.79□□□□□ -0.36
DDX41-201ENST00000330503 OR10J3Q5JRS4 329 aa12.79□□□□□ -0.36
DDX41-201ENST00000330503 Q6AWC8 147 aa12.79□□□□□ -0.36
DDX41-201ENST00000330503 DCANP1Q8TF63 244 aa12.79□□□□□ -0.36
DDX41-201ENST00000330503 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
DDX41-201ENST00000330503 ALKBH7Q9BT30 221 aaPredicted RBP12.79□□□□□ -0.36
DDX41-201ENST00000330503 C11orf21Q9P2W6 132 aa12.79□□□□□ -0.36
DDX41-201ENST00000330503 ORM1P02763 201 aa12.79□□□□□ -0.36
DDX41-201ENST00000330503 RIGQ13278 110 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms