RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 DPM2O94777 84 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 IGHV3-43DP0DP04 118 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 S1PR3Q99500 378 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 FAM208BQ5VWN6 2430 aa9.35□□□□□ -0.91
SHMT2-201ENST00000328923 PGPA6NDG6 321 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 SMKR1H3BMG3 65 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 PLAUP00749 431 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 CD7P09564 240 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 TMEM155Q4W5P6 130 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 FAM90A1Q86YD7 464 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 AMN1Q8IY45 258 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 C10orf126Q8N4M7 172 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 KIR2DL5BQ8NHK3 375 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 FXYD5Q96DB9 178 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 TM4SF5O14894 197 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 SLC25A20O43772 301 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 NPYP01303 97 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 MYCNOSP40205 109 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 CRIP2P52943 208 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-201ENST00000328923 GATD1Q8NB37 220 aa9.34□□□□□ -0.91
SHMT2-201ENST00000328923 SRSF12Q8WXF0 261 aaKnown RBP9.34□□□□□ -0.91
SHMT2-201ENST00000328923 TRAV8-4A0A0B4J246 113 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 MDP1Q86V88 176 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 Q8N1Y9 231 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 OR11H6Q8NGC7 330 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 AKAP13Q12802 2813 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 SMG1Q96Q15 3661 aaKnown RBP9.33□□□□□ -0.92
SHMT2-201ENST00000328923 TRAV2A0A0B4J234 112 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 A0A1B0GX51 115 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 PINLYPA6NC86 204 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 SPINK14Q6IE38 97 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 PDPNQ86YL7 162 aa9.33□□□□□ -0.92
SHMT2-201ENST00000328923 NTN5Q8WTR8 489 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-201ENST00000328923 GRPP07492 148 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 TWIST1Q15672 202 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 ORMDL3Q8N138 153 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 AAMDCQ9H7C9 122 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 U3KQK5 164 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 ZFYVE26Q68DK2 2539 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 RBAKDNA6NC62 111 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 CECR9P0C854 216 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 ZNF672Q499Z4 452 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-201ENST00000328923 LYRM7Q5U5X0 104 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 C11orf53Q8IXP5 236 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 NPIPB3Q92617 1050 aa9.32□□□□□ -0.92
SHMT2-201ENST00000328923 FLYWCH2Q96CP2 140 aaKnown RBP9.32□□□□□ -0.92
SHMT2-201ENST00000328923 MRPL35Q9NZE8 188 aaKnown RBP9.32□□□□□ -0.92
SHMT2-201ENST00000328923 H3BTX0 84 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 LEPP41159 167 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 UBE2D1P51668 147 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 C4orf26Q17RF5 130 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 C3orf36Q3SXR2 165 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 ZNF714Q96N38 554 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 ASCL2Q99929 193 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 IFI27L2Q9H2X8 130 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 GNG12Q9UBI6 72 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 F8WDY8 70 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 M0R2P5 195 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 WNT9BO14905 357 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 COX7A2P2O60397 106 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 ORM2P19652 201 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 C3orf22Q8N5N4 141 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 FMC1Q96HJ9 113 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 PRNDQ9UKY0 176 aa9.31□□□□□ -0.92
SHMT2-201ENST00000328923 SVILO95425 2214 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 NCBP2LA6PVI3 153 aaKnown RBP9.3□□□□□ -0.92
SHMT2-201ENST00000328923 GATA4P43694 442 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 PRCDQ00LT1 54 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 MZT1Q08AG7 82 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 MRPL51Q4U2R6 128 aaKnown RBP9.3□□□□□ -0.92
SHMT2-201ENST00000328923 C2orf83Q53S99 150 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 HRCT1Q6UXD1 115 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 CXXC4Q9H2H0 198 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 IGHV3-64DA0A0J9YX35 117 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 TEX49A0A1B0GTD5 131 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 FAM236AA0A1B0GUQ0 79 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 FAM236BA0A1B0GV22 79 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 SRSF2Q01130 221 aaKnown RBP9.3□□□□□ -0.92
SHMT2-201ENST00000328923 RPL39P5Q59GN2 51 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 FAM104BQ5XKR9 115 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 PATE2Q6UY27 113 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 OR4C13Q8NGP0 309 aa9.3□□□□□ -0.92
SHMT2-201ENST00000328923 TNCP24821 2201 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 ZNF785A8K8V0 405 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 LINC01619G3V211 115 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 PRB4P10163 310 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-201ENST00000328923 C10orf113Q5VZT2 155 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 CEMP1Q6PRD7 247 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-201ENST00000328923 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
SHMT2-201ENST00000328923 MSRB2Q9Y3D2 182 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 DMXL2Q8TDJ6 3036 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 NDUFA3O95167 84 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 EFNA4P52798 201 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 LOXL3P58215 753 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 ZNF56Q15929 161 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 Q86TA4 180 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 TMEM219Q86XT9 240 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 HES7Q9BYE0 225 aa9.29□□□□□ -0.92
SHMT2-201ENST00000328923 METRNQ9UJH8 293 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms