RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 A0A1W2PPI3 338 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
PCM1-202ENST00000327578 CHKB-CPT1BH3BT56 60 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 SPINK13Q1W4C9 94 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 FAM104BQ5XKR9 115 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 WIPF3A6NGB9 483 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 LGALS9BQ3B8N2 356 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 NOTCH3Q9UM47 2321 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 IGHV3-38A0A0C4DH36 116 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 SMIM27A0A1W2PRY6 76 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 PCNX1Q96RV3 2341 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 EFNA2O43921 213 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 KLK9Q9UKQ9 250 aa11.14□□□□□ -0.63
PCM1-202ENST00000327578 HLA-DRB4P13762 266 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 PDE6HQ13956 83 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 HLA-DRB4X5D2U9 266 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 H3BUX3 64 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 LYPD3O95274 346 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 TNS1Q9HBL0 1735 aaKnown RBP11.13□□□□□ -0.63
PCM1-202ENST00000327578 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
PCM1-202ENST00000327578 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
PCM1-202ENST00000327578 C9JQL5 133 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 AMTNQ6UX39 209 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 BRD3OSQ6XYD6 125 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 RHPN1-AS1Q9BWJ2 59 aa11.13□□□□□ -0.63
PCM1-202ENST00000327578 CLPSL2Q6UWE3 100 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 ZNF106Q9H2Y7 1883 aaKnown RBP11.12□□□□□ -0.63
PCM1-202ENST00000327578 PINLYPA6NC86 204 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 CDKN1BP46527 198 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 SIGLEC8Q9NYZ4 499 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 NDUFA12Q9UI09 145 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 SRRM5B3KS81 715 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 CRYGSP22914 178 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 A0A0G2JRQ6 117 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 F5H768 121 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 BAALC-AS2P0C853 105 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 RNASE13Q5GAN3 156 aaKnown RBP11.12□□□□□ -0.63
PCM1-202ENST00000327578 ORMDL1Q9P0S3 153 aa11.12□□□□□ -0.63
PCM1-202ENST00000327578 MRPL35Q9NZE8 188 aaKnown RBP11.12□□□□□ -0.63
PCM1-202ENST00000327578 SMIM20Q8N5G0 67 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 DENND4CQ5VZ89 1909 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 CGB3P0DN86 165 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 ASPHD1Q5U4P2 390 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 Q6P435 159 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 BAALCQ8WXS3 180 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 NLRC5Q86WI3 1866 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 CFHR4Q92496 578 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 DEFB131AP59861 70 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
PCM1-202ENST00000327578 COL6A6A6NMZ7 2263 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 ABCA4P78363 2273 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 ZNF492Q9P255 531 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 ZNF581Q9P0T4 197 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 NCOA6Q14686 2063 aaPredicted RBP11.1□□□□□ -0.63
PCM1-202ENST00000327578 CRYGCP07315 174 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 F8VRH5 84 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 PFN1P07737 140 aaKnown RBP11.1□□□□□ -0.63
PCM1-202ENST00000327578 NTN5Q8WTR8 489 aaPredicted RBP11.1□□□□□ -0.63
PCM1-202ENST00000327578 RNF5Q99942 180 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 PLCE1Q9P212 2302 aa11.1□□□□□ -0.63
PCM1-202ENST00000327578 PKDREJQ9NTG1 2253 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 C20orf204Q6ZNR8 217 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 DAZ1Q9NQZ3 744 aaKnown RBP11.09□□□□□ -0.63
PCM1-202ENST00000327578 XCL2Q9UBD3 114 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 MST1LQ2TV78 715 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
PCM1-202ENST00000327578 M0R1W7 72 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 CCL25O15444 150 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 EFNA4P52798 201 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 GAFA1Q96PS6 74 aa11.09□□□□□ -0.63
PCM1-202ENST00000327578 TRAV12-2A0A075B6T6 113 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 LHBP01229 141 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 DAD1P61803 113 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 IGLV3-32A0A0A0MS00 114 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 RHODO00212 210 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 RNF144BQ7Z419 303 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 GGNQ86UU5 652 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 ZNRF2Q8NHG8 242 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 PNRC2Q9NPJ4 139 aaKnown RBP11.08□□□□□ -0.64
PCM1-202ENST00000327578 DKK2Q9UBU2 259 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 EPOPA6NHQ4 379 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 PRSS29PA6NIE9 313 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 SIVA1O15304 175 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 V9GYV3 84 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 VWC2Q2TAL6 325 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 SDHAF1A6NFY7 115 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 CGB7P0DN87 165 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 MDS2Q8NDY4 140 aa11.08□□□□□ -0.64
PCM1-202ENST00000327578 J3QQQ9 107 aa11.07□□□□□ -0.64
PCM1-202ENST00000327578 Q6ZRM9 215 aa11.07□□□□□ -0.64
PCM1-202ENST00000327578 NDUFS7O75251 213 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms