RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 GNG4P50150 75 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 DEFB131AP59861 70 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 ODF3L2Q3SX64 289 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 FOXI2Q6ZQN5 318 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 C9orf47Q6ZRZ4 202 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 F6UB75 175 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 CMC4P56277 68 aaPredicted RBP7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 DEFB1P60022 68 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 ERCC8Q13216 396 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 TMEM241Q24JQ0 296 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 SGK494Q96LW2 274 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 SAV1Q9H4B6 383 aaPredicted RBP7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 LY96Q9Y6Y9 160 aa7.63□□□□□ -1.19
VIPAS39-201ENST00000327028 NOTCH3Q9UM47 2321 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 A0A0J9YX75 114 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 HIST1H1AQ02539 215 aaPredicted RBP7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 TMEM78Q5T7P6 136 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 PRNTQ86SH4 94 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 SMIM12Q96EX1 92 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 FAM110AQ9BQ89 295 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 AGPAT4-IT1Q9H0P7 198 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 SDF2L1Q9HCN8 221 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 TRRAPQ9Y4A5 3859 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 APOC3P02656 99 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 ZNF705DP0CH99 300 aaPredicted RBP7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 ZNF705BP0CI00 300 aaPredicted RBP7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 EBLN2Q6P2I7 272 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 BAGE2Q86Y30 109 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 Q8TAT8 98 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 TVP23CQ96ET8 276 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 PPP1R14DQ9NXH3 145 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 ZFP30Q9Y2G7 519 aa7.62□□□□□ -1.19
VIPAS39-201ENST00000327028 OR11H12B2RN74 326 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 IGLV2-8P01709 118 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 ZNF138P52744 262 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 PNRC1Q12796 327 aaPredicted RBP7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 KRTAP21-3Q3LHN1 58 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 GDF5OSQ5U4N7 250 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 LINC01551Q86U37 167 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 LINC00477Q96M19 166 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 SORL1Q92673 2214 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 PGPEP1LA6NFU8 196 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 DUSP14O95147 198 aaKnown RBP7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 HLA-DRB4P13762 266 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 RPL23P62829 140 aaKnown RBP7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 TMEM183AQ8IXX5 376 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 NDFIP1Q9BT67 221 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 ZNF492Q9P255 531 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 LENEPQ9Y5L5 61 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 HLA-DRB4X5D2U9 266 aa7.61□□□□□ -1.19
VIPAS39-201ENST00000327028 ADIRFQ15847 76 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 SAPCD1Q5SSQ6 148 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 SVBPQ8N300 66 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 OCC1Q8TAD7 63 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 PRR25Q96S07 402 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 MLST8Q9BVC4 326 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 KNCNA6PVL3 124 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 K7EN84 100 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 CD7P09564 240 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 CT45A10P0DMU9 189 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 COX8CQ7Z4L0 72 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 APRG1Q8IVJ8 170 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 NHLRC2Q8NBF2 726 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 ODF3Q96PU9 254 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 CMYA5Q8N3K9 4069 aa7.6□□□□□ -1.19
VIPAS39-201ENST00000327028 TRBV7-9A0A0J9YWB2 115 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 A8MTW9 85 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 ZNF124Q15973 351 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 ACTL10Q5JWF8 245 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 FAM19A4Q96LR4 140 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 ASCL2Q99929 193 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 H3BMM0 161 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 GTSCR1Q86UQ5 136 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 ISOC2Q96AB3 205 aa7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 AURKAIP1Q9NWT8 199 aaPredicted RBP7.59□□□□□ -1.19
VIPAS39-201ENST00000327028 M0R036 132 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 SNAPINO95295 136 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 GCGP01275 180 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 MGST1P10620 155 aaKnown RBP7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 CLRN3Q8NCR9 226 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 C8orf49Q96NF6 230 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 CLUHP3Q96NS8 147 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 BIN3Q9NQY0 253 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 CRISP2P16562 243 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 LEPP41159 167 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 OXLD1Q5BKU9 147 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 OR4B1Q8NGF8 309 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 ZC2HC1AQ96GY0 325 aa7.58□□□□□ -1.2
VIPAS39-201ENST00000327028 B4DEV8 164 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 EGFEM1PQ0D2K5 195 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 RHEBQ15382 184 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 ZFAND2AQ8N6M9 145 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 AGRNO00468 2067 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 OR5I1Q13606 314 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 STHQ8IWL8 128 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 WFDC10AQ9H1F0 79 aa7.57□□□□□ -1.2
VIPAS39-201ENST00000327028 RBMY1BA6NDE4 496 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms