RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 USP24Q9UPU5 2620 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 FAM106CPP0CH98 169 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 FAM106AQ4KMX7 169 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 Q8N9W7 124 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 VGLL1Q99990 258 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 A0A1W2PRD5 423 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 A0A1W2PRF3 423 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 A0A1W2PRM7 423 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 C2orf91Q6ZV80 131 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 ZNF502Q8TBZ5 544 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 SIRPDQ9H106 197 aa15.42■□□□□ 0.06
SOX2-201ENST00000325404 MUC21A0A0G2JKD1 596 aa15.41■□□□□ 0.06
SOX2-201ENST00000325404 MUC21A0A140T8X8 626 aa15.41■□□□□ 0.06
SOX2-201ENST00000325404 FABP5P3A8MUU1 101 aa15.41■□□□□ 0.06
SOX2-201ENST00000325404 CKS2P33552 79 aa15.41■□□□□ 0.06
SOX2-201ENST00000325404 ZNF80P51504 273 aaPredicted RBP15.41■□□□□ 0.06
SOX2-201ENST00000325404 LOXL1Q08397 574 aaPredicted RBP15.41■□□□□ 0.06
SOX2-201ENST00000325404 PSMG4Q5JS54 123 aa15.41■□□□□ 0.06
SOX2-201ENST00000325404 MUC21Q5SSG8 566 aa15.41■□□□□ 0.06
SOX2-201ENST00000325404 ZNF575Q86XF7 245 aa15.41■□□□□ 0.06
SOX2-201ENST00000325404 LOC389332A0A1B0GUA5 103 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 SEC11AP67812 179 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 TWIST1Q15672 202 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 VAMP3Q15836 100 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 TIMM8BQ9Y5J9 83 aaPredicted RBP15.4■□□□□ 0.06
SOX2-201ENST00000325404 IGHV3-23P01764 117 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 FGF6P10767 208 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 COTL1Q14019 142 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 LINC01559Q495D7 138 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 OR4C5Q8NGB2 326 aa15.4■□□□□ 0.06
SOX2-201ENST00000325404 PIP4P2Q8N4L2 257 aa15.39■□□□□ 0.05
SOX2-201ENST00000325404 OR8A1Q8NGG7 326 aa15.39■□□□□ 0.05
SOX2-201ENST00000325404 SLC50A1Q9BRV3 221 aa15.39■□□□□ 0.05
SOX2-201ENST00000325404 ZFAND3Q9H8U3 227 aa15.39■□□□□ 0.05
SOX2-201ENST00000325404 SIVA1O15304 175 aa15.39■□□□□ 0.05
SOX2-201ENST00000325404 BUB3O43684 328 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 ZFP36P26651 326 aaKnown RBP15.38■□□□□ 0.05
SOX2-201ENST00000325404 UBE2E1P51965 193 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 Q8TAT8 98 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 SPTAN1Q13813 2472 aaKnown RBP15.38■□□□□ 0.05
SOX2-201ENST00000325404 DCHS2Q6V1P9 2916 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 NDUFS7O75251 213 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 NPYP01303 97 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 PRB4P10163 310 aaPredicted RBP15.38■□□□□ 0.05
SOX2-201ENST00000325404 EFNA4P52798 201 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 BOD1L2Q8IYS8 172 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 IFI27L1Q96BM0 104 aa15.38■□□□□ 0.05
SOX2-201ENST00000325404 PIFOQ8TCI5 191 aa15.37■□□□□ 0.05
SOX2-201ENST00000325404 RNF185Q96GF1 192 aa15.37■□□□□ 0.05
SOX2-201ENST00000325404 GOSR1O95249 250 aa15.37■□□□□ 0.05
SOX2-201ENST00000325404 TMEM97Q5BJF2 176 aa15.37■□□□□ 0.05
SOX2-201ENST00000325404 OR9G4Q8NGQ1 327 aa15.37■□□□□ 0.05
SOX2-201ENST00000325404 MRPL53Q96EL3 112 aaKnown RBP15.37■□□□□ 0.05
SOX2-201ENST00000325404 C15orf32Q32M92 178 aa15.36■□□□□ 0.05
SOX2-201ENST00000325404 MAP1LC3AQ9H492 121 aa15.36■□□□□ 0.05
SOX2-201ENST00000325404 ORM1P02763 201 aa15.36■□□□□ 0.05
SOX2-201ENST00000325404 HLA-DMBP28068 263 aa15.35■□□□□ 0.05
SOX2-201ENST00000325404 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.35■□□□□ 0.05
SOX2-201ENST00000325404 AJUBAQ96IF1 538 aa15.35■□□□□ 0.05
SOX2-201ENST00000325404 NXT2Q9NPJ8 142 aaKnown RBP15.35■□□□□ 0.05
SOX2-201ENST00000325404 HIF1ANQ9NWT6 349 aa15.35■□□□□ 0.05
SOX2-201ENST00000325404 PEF1Q9UBV8 284 aaKnown RBP15.35■□□□□ 0.05
SOX2-201ENST00000325404 CACNG7P62955 275 aa15.35■□□□□ 0.05
SOX2-201ENST00000325404 ATP6V0BQ99437 205 aa15.35■□□□□ 0.05
SOX2-201ENST00000325404 ZFYVE26Q68DK2 2539 aa15.34■□□□□ 0.05
SOX2-201ENST00000325404 ARHGAP32A7KAX9 2087 aa15.34■□□□□ 0.05
SOX2-201ENST00000325404 DOPEY1Q5JWR5 2465 aa15.34■□□□□ 0.05
SOX2-201ENST00000325404 RNASE8Q8TDE3 154 aaKnown RBP15.34■□□□□ 0.05
SOX2-201ENST00000325404 SMAD7O15105 426 aaKnown RBP15.33■□□□□ 0.04
SOX2-201ENST00000325404 CLEC3BP05452 202 aa15.33■□□□□ 0.04
SOX2-201ENST00000325404 RBX1P62877 108 aa15.33■□□□□ 0.04
SOX2-201ENST00000325404 IGFL4Q6B9Z1 124 aa15.33■□□□□ 0.04
SOX2-201ENST00000325404 AKAP6Q13023 2319 aa15.33■□□□□ 0.04
SOX2-201ENST00000325404 CLPSL1A2RUU4 121 aa15.32■□□□□ 0.04
SOX2-201ENST00000325404 SMKR1H3BMG3 65 aa15.32■□□□□ 0.04
SOX2-201ENST00000325404 FCER1GP30273 86 aa15.32■□□□□ 0.04
SOX2-201ENST00000325404 OR4X2Q8NGF9 303 aa15.32■□□□□ 0.04
SOX2-201ENST00000325404 TRBV7-1A0A0A6YYK4 115 aa15.32■□□□□ 0.04
SOX2-201ENST00000325404 PRB1P04280 392 aa15.32■□□□□ 0.04
SOX2-201ENST00000325404 PRAC2D3DTV9 90 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 ATP6V0E1O15342 81 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 CDKN1BP46527 198 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 PRSS57Q6UWY2 283 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 EEF1AKMT3Q96AZ1 226 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 PRSS47A8MTI9 375 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 HSD52Q0P140 79 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 ERCC8Q13216 396 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 BBC3Q96PG8 261 aaPredicted RBP15.31■□□□□ 0.04
SOX2-201ENST00000325404 U3KQE9 123 aa15.31■□□□□ 0.04
SOX2-201ENST00000325404 A1L4Q6 167 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 A6NDN8 102 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 CBY3A6NI87 242 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 SVIPQ8NHG7 77 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 CCDC140Q96MF4 163 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 ZMAT4Q9H898 229 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 MSRB1Q9NZV6 116 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 C7orf71A4D174 169 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 TNFRSF6BO95407 300 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 ECSCRQ19T08 205 aa15.3■□□□□ 0.04
SOX2-201ENST00000325404 AMMECR1LQ6DCA0 310 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms