RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 G3V4G9 280 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 M0QZ24 198 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 GNG7O60262 68 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 SCGB2A1O75556 95 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 CTSGP08311 255 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 ARL14EPLP0DKL9 152 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 SRIP30626 198 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 GNG4P50150 75 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 RAB9AP51151 201 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 SLC35B1P78383 322 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 Q56UQ5 140 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 GCSAMLQ5JQS6 135 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 FAM231DQ6ZW35 169 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 RNF152Q8N8N0 203 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 MYOZ3Q8TDC0 251 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 CHCHD1Q96BP2 118 aaKnown RBP9.87□□□□□ -0.83
DDX39A-202ENST00000324340 TMEM191AQ9H0A3 160 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 KLK15Q9H2R5 256 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 TLN2Q9Y4G6 2542 aa9.87□□□□□ -0.83
DDX39A-202ENST00000324340 ZFHX3Q15911 3703 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 A0A0G2JLM5 398 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 C2orf70A6NJV1 201 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 ELANEP08246 267 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 PF4V1P10720 104 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 PSG1P11464 419 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 FOXE3Q13461 319 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 ZNF329Q86UD4 541 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 ZNF414Q96IQ9 312 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 C16orf95Q9H693 158 aa9.86□□□□□ -0.83
DDX39A-202ENST00000324340 HIVEP2P31629 2446 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.85□□□□□ -0.83
DDX39A-202ENST00000324340 TRAV34A0A0B4J273 112 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 HELTA6NFD8 242 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 OR2T8A6NH00 312 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 SLC17A3O00476 420 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 IGHV3-23P01764 117 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 CLEC3BP05452 202 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 C10orf99Q6UWK7 81 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 PATE2Q6UY27 113 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 OR1L4Q8NGR5 311 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 GRAMD2BQ96HH9 432 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 RCHY1Q96PM5 261 aa9.85□□□□□ -0.83
DDX39A-202ENST00000324340 ANK3Q12955 4377 aaKnown RBP9.85□□□□□ -0.83
DDX39A-202ENST00000324340 SONP18583 2426 aaKnown RBP9.84□□□□□ -0.83
DDX39A-202ENST00000324340 WI2-2373I1.2A0A1W2PRP0 233 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 M0R2Z0 102 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 OR7C2O60412 319 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 NDUFA7O95182 113 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 GPR183P32249 361 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 AMMECR1LQ6DCA0 310 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 UFSP1Q6NVU6 142 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 OR5A1Q8NGJ0 315 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 MRPL32Q9BYC8 188 aaKnown RBP9.84□□□□□ -0.83
DDX39A-202ENST00000324340 SMPXQ9UHP9 88 aa9.84□□□□□ -0.83
DDX39A-202ENST00000324340 YTHDF2Q9Y5A9 579 aaKnown RBP9.84□□□□□ -0.83
DDX39A-202ENST00000324340 PGPEP1LA6NFU8 196 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 NUDT3O95989 172 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 PSG9Q00887 426 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 MPV17L2Q567V2 206 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 EBLN2Q6P2I7 272 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 CLEC19AQ6UXS0 136 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 ZNF491Q8N8L2 437 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 FER1L6-AS1Q8NA97 138 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 F8P00451 2351 aa9.83□□□□□ -0.84
DDX39A-202ENST00000324340 HIVEP1P15822 2718 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 A0A1W2PRE2 83 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 H3BRM9 83 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 COX7A2P2O60397 106 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 RIPPLY3P57055 190 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 CENPWQ5EE01 88 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 PSMG4Q5JS54 123 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 C10orf113Q5VZT2 155 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 LCNL1Q6ZST4 164 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 NEGR1Q7Z3B1 354 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 RNF125Q96EQ8 232 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 SCRT2Q9NQ03 307 aa9.82□□□□□ -0.84
DDX39A-202ENST00000324340 GAGE10A6NGK3 116 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 OR4C46A6NHA9 309 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 ORM2P19652 201 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 NTF3P20783 257 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 SPATA31B1PQ5VZV4 182 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 PQLC2Q6ZP29 291 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 MIR17HGQ75NE6 70 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 NHLRC2Q8NBF2 726 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 OR4X2Q8NGF9 303 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 OR1B1Q8NGR6 318 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 LINC01006Q8NI28 216 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 UBE2E2Q96LR5 201 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 ZFAND3Q9H8U3 227 aa9.81□□□□□ -0.84
DDX39A-202ENST00000324340 TECRQ9NZ01 308 aaKnown RBP9.81□□□□□ -0.84
DDX39A-202ENST00000324340 A6NDN8 102 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 SYS1-DBNDD2H3BUS1 97 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 IL4P05112 153 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 C8orf88P0DMB2 117 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 ARL3P36405 182 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 LYZP61626 148 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 IBA57Q5T440 356 aaKnown RBP9.8□□□□□ -0.84
DDX39A-202ENST00000324340 MORN5Q5VZ52 161 aa9.8□□□□□ -0.84
DDX39A-202ENST00000324340 LINC00305Q7Z4B0 112 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms