RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DNAJC4Q9NNZ3 241 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 SH2D7A6NKC9 451 aaPredicted RBP4.87□□□□□ -1.63
CSTF3-201ENST00000323959 ZNF253O75346 499 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 PLA2G1BP04054 148 aaKnown RBP4.87□□□□□ -1.63
CSTF3-201ENST00000323959 NPSP0C0P6 89 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 C8orf88P0DMB2 117 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 GNB1P62873 340 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 LCE2AQ5TA79 106 aaPredicted RBP4.87□□□□□ -1.63
CSTF3-201ENST00000323959 MIC13Q5XKP0 118 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 IMMP2LQ96T52 175 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 CTDSP1Q9GZU7 261 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 EIF5A2Q9GZV4 153 aaKnown RBP4.87□□□□□ -1.63
CSTF3-201ENST00000323959 HILPDAQ9Y5L2 63 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 RFNGQ9Y644 331 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 TRBV7-1A0A0A6YYK4 115 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 F8W735 103 aaPredicted RBP4.87□□□□□ -1.63
CSTF3-201ENST00000323959 PSMB8P28062 276 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 GCHFRP30047 84 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 OR10J1P30954 320 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 RAB9AP51151 201 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 ELOBQ15370 118 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 C10orf55Q5SWW7 151 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 GFI1BQ5VTD9 330 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 ZNF491Q8N8L2 437 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 ZNF414Q96IQ9 312 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 IGHV3-72A0A0B4J1Y9 119 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 TRGC1P0CF51 173 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 MFAP4P55083 255 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 NDPQ00604 133 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 PDZD11Q5EBL8 140 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 TMEM183AQ8IXX5 376 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 ZNF502Q8TBZ5 544 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 SLC25A2Q9BXI2 301 aa4.87□□□□□ -1.63
CSTF3-201ENST00000323959 FAT3Q8TDW7 4589 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 IGHV4-4A0A075B6R2 117 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 LOC102724200A0A096LPH7 203 aaPredicted RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 FBLL1A6NHQ2 334 aaKnown RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 IGLV1-40P01703 118 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 TRGC2P03986 189 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 PPIFP30405 207 aaKnown RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 CDKN1BP46527 198 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 RND2P52198 227 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 PDE6HQ13956 83 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 IQCJQ1A5X6 159 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 DMRTA1Q5VZB9 504 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 PATE2Q6UY27 113 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 NECAP1Q8NC96 275 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 Q8WTZ3 238 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 TMEM37Q8WXS4 190 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 TVP23CQ96ET8 276 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 USMG5Q96IX5 58 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 GPR82Q96P67 336 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 GNB4Q9HAV0 340 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 SDF2L1Q9HCN8 221 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 NAT8Q9UHE5 227 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 H3BRN7 92 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 MRPS12O15235 138 aaKnown RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 IGKV1-17P01599 117 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 CXCL1P09341 107 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 OR10J4P0C629 311 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 SLURP1P55000 103 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 ELLP55199 621 aaPredicted RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 FAM3BP58499 235 aaPredicted RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 NANOS2P60321 138 aaKnown RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 PLGLAQ15195 96 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 COA6Q5JTJ3 125 aaKnown RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 C10orf113Q5VZT2 155 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 NPIPB3Q92617 1050 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 RARRES2Q99969 163 aa4.86□□□□□ -1.63
CSTF3-201ENST00000323959 MRPL36Q9P0J6 103 aaKnown RBP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 PUS1Q9Y606 427 aaKnown RBP eCLIP4.86□□□□□ -1.63
CSTF3-201ENST00000323959 TNCP24821 2201 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 TRAV9-1A0A075B6T8 112 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 A0A087X0K7 114 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 ZNF705GA8MUZ8 300 aaPredicted RBP4.85□□□□□ -1.63
CSTF3-201ENST00000323959 CIDEAO60543 219 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 ARL14EPLP0DKL9 152 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 LRP2P98164 4655 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 C1orf194Q5T5A4 169 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 COX8CQ7Z4L0 72 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 C6orf223Q8N319 242 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 SHANK2-AS3Q9BTD1 123 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 HINT2Q9BX68 163 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 SLC25A22Q9H936 323 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 SEPSECSQ9HD40 501 aaKnown RBP4.85□□□□□ -1.63
CSTF3-201ENST00000323959 KLF12Q9Y4X4 402 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 SERTM2A0A1B0GWG4 89 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 HYPMO75409 117 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 APOC4P55056 127 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 RBX1P62877 108 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 LCN15Q6UWW0 184 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 OR51G1Q8NGK1 321 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 FXYD5Q96DB9 178 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 ANAPC16Q96DE5 110 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 BTF3L4Q96K17 158 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 FAM210BQ96KR6 192 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 NIPSNAP3BQ9BS92 247 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 GNG13Q9P2W3 67 aa4.85□□□□□ -1.63
CSTF3-201ENST00000323959 U3KQE9 123 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms