RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 HBG1P69891 147 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 HBG2P69892 147 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 MIR17HGQ75NE6 70 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 CCDC28AQ8IWP9 274 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 Q8TAT8 98 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 RXFP4Q8TDU9 374 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 PYGO2Q9BRQ0 406 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 GSN-AS1Q9NRJ2 163 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 OR5AC2Q9NZP5 309 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 TMEM14CQ9P0S9 112 aa8.55□□□□□ -1.04
TPM3-204ENST00000323144 S100A11P31949 105 aa8.54□□□□□ -1.04
TPM3-204ENST00000323144 ASAH1Q13510 395 aa8.54□□□□□ -1.04
TPM3-204ENST00000323144 LRRC37A5PQ49AS3 106 aa8.54□□□□□ -1.04
TPM3-204ENST00000323144 FAM122CQ6P4D5 195 aa8.54□□□□□ -1.04
TPM3-204ENST00000323144 PHYHIPLQ96FC7 376 aa8.54□□□□□ -1.04
TPM3-204ENST00000323144 FAM167A-AS1Q96KT0 104 aa8.54□□□□□ -1.04
TPM3-204ENST00000323144 TRGV1A0A0A0MS02 117 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 SLC25A5P05141 298 aaKnown RBP8.53□□□□□ -1.04
TPM3-204ENST00000323144 HIST1H1EP10412 219 aaKnown RBP8.53□□□□□ -1.04
TPM3-204ENST00000323144 NHLH2Q02577 135 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 DAZ2Q13117 558 aaKnown RBP8.53□□□□□ -1.04
TPM3-204ENST00000323144 ICAM4Q14773 271 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 ESRGQ1W209 222 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 ZFAND2AQ8N6M9 145 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 OR5C1Q8NGR4 320 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 CHAC2Q8WUX2 184 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 VSIG2Q96IQ7 327 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 VGLL1Q99990 258 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 AGPAT4-IT1Q9H0P7 198 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 Q9H3A6 140 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
TPM3-204ENST00000323144 TP53TG3Q9ULZ0 132 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 MRPS16Q9Y3D3 137 aaKnown RBP8.53□□□□□ -1.04
TPM3-204ENST00000323144 KLF12Q9Y4X4 402 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 TIMM9Q9Y5J7 89 aa8.53□□□□□ -1.04
TPM3-204ENST00000323144 DNAH5Q8TE73 4624 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 A0A096LPF7 62 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 H0YIZ8 118 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 ZNF324O75467 553 aaPredicted RBP8.52□□□□□ -1.05
TPM3-204ENST00000323144 OR10J4P0C629 311 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 CRISP2P16562 243 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 TCL1AP56279 114 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 PDE6HQ13956 83 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 ZNF680Q8NEM1 530 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 ZNF503Q96F45 646 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 UPK3BQ9BT76 320 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 FUT9Q9Y231 359 aa8.52□□□□□ -1.05
TPM3-204ENST00000323144 TRGV2A0A075B6R0 118 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 MPDU1O75352 247 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 EIF3GO75821 320 aaKnown RBP eCLIP8.51□□□□□ -1.05
TPM3-204ENST00000323144 IGHV3-53P01767 116 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 RNASE4P34096 147 aaKnown RBP8.51□□□□□ -1.05
TPM3-204ENST00000323144 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 MZT2BQ6NZ67 158 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 SPATA12Q7Z6I5 190 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 EIF4E3Q8N5X7 224 aaKnown RBP8.51□□□□□ -1.05
TPM3-204ENST00000323144 ENKURQ8TC29 256 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 FXYD5Q96DB9 178 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 Q9H8V8 135 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 PRELID1Q9Y255 219 aa8.51□□□□□ -1.05
TPM3-204ENST00000323144 SPINK4O60575 86 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 LINC00315P59091 139 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 IFITM3Q01628 133 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 ATP6V1FQ16864 119 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 C9orf47Q6ZRZ4 202 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 LINC00467Q9BRT7 94 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 WDR61Q9GZS3 305 aaKnown RBP8.5□□□□□ -1.05
TPM3-204ENST00000323144 AAMDCQ9H7C9 122 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 NDUFA13Q9P0J0 144 aa8.5□□□□□ -1.05
TPM3-204ENST00000323144 H3BNG1 76 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 UPK1BO75841 260 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 GPX1P07203 203 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 H2BFSP57053 126 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 UBE2L3P68036 154 aaKnown RBP8.49□□□□□ -1.05
TPM3-204ENST00000323144 ANXA2RQ3ZCQ2 193 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 TMEM78Q5T7P6 136 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 MAPKAPK5-AS1Q8N8E1 139 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 C18orf15Q96N68 181 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 PAXXQ9BUH6 204 aa8.49□□□□□ -1.05
TPM3-204ENST00000323144 MRPL32Q9BYC8 188 aaKnown RBP8.49□□□□□ -1.05
TPM3-204ENST00000323144 E5RGE8 158 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 RGS13O14921 159 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 OR7C2O60412 319 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 MUC21Q5SSG8 566 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 IBA57Q5T440 356 aaKnown RBP8.48□□□□□ -1.05
TPM3-204ENST00000323144 Q6ZRN7 208 aaPredicted RBP8.48□□□□□ -1.05
TPM3-204ENST00000323144 ST6GAL2Q96JF0 529 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 LINC00477Q96M19 166 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 NMES1Q9C002 83 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 OR51M1Q9H341 326 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 ZNF492Q9P255 531 aa8.48□□□□□ -1.05
TPM3-204ENST00000323144 IGHV1OR15-1A0A075B7D0 117 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 NXPH4O95158 308 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 NBEAP1P0C6P0 100 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 FUSP35637 526 aaKnown RBP eCLIP8.47□□□□□ -1.05
TPM3-204ENST00000323144 ZNF138P52744 262 aa8.47□□□□□ -1.05
TPM3-204ENST00000323144 ZNF415Q09FC8 603 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms