RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 TMEM262E9PQX1 116 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 IGLC1P0CG04 106 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 ATP5L2Q7Z4Y8 100 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 CYSLTR1Q9Y271 337 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 IGHV3-53P01767 116 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 PET117Q6UWS5 81 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 IGFL3Q6UXB1 125 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 IL17RELQ6ZVW7 336 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 FAM120AOSQ5T036 256 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 FXYD5Q96DB9 178 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 RHPN1-AS1Q9BWJ2 59 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 MOB4Q9Y3A3 225 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 LTBP2Q14767 1821 aa13.12□□□□□ -0.31
CLIP4-201ENST00000320081 VGLL1Q99990 258 aa13.11□□□□□ -0.31
CLIP4-201ENST00000320081 COL4A4P53420 1690 aaPredicted RBP13.11□□□□□ -0.31
CLIP4-201ENST00000320081 TRBV19A0A075B6N1 114 aa13.11□□□□□ -0.31
CLIP4-201ENST00000320081 IGLC7A0M8Q6 106 aa13.11□□□□□ -0.31
CLIP4-201ENST00000320081 UBE2L6O14933 153 aa13.11□□□□□ -0.31
CLIP4-201ENST00000320081 SYNJ2BPP57105 145 aa13.11□□□□□ -0.31
CLIP4-201ENST00000320081 TEX36Q5VZQ5 186 aa13.11□□□□□ -0.31
CLIP4-201ENST00000320081 ZC2HC1AQ96GY0 325 aa13.11□□□□□ -0.31
CLIP4-201ENST00000320081 KRTAP27-1Q3LI81 207 aa13.1□□□□□ -0.31
CLIP4-201ENST00000320081 ODF3L1Q8IXM7 274 aa13.1□□□□□ -0.31
CLIP4-201ENST00000320081 F6UB75 175 aa13.1□□□□□ -0.31
CLIP4-201ENST00000320081 DPM2O94777 84 aa13.1□□□□□ -0.31
CLIP4-201ENST00000320081 IGLL1P15814 213 aa13.1□□□□□ -0.31
CLIP4-201ENST00000320081 BRWD1-AS2P59051 145 aa13.1□□□□□ -0.31
CLIP4-201ENST00000320081 BCL6BQ8N143 479 aaPredicted RBP13.1□□□□□ -0.31
CLIP4-201ENST00000320081 UBE2E2Q96LR5 201 aa13.1□□□□□ -0.31
CLIP4-201ENST00000320081 TMEM8BA6NDV4 472 aa13.1□□□□□ -0.31
CLIP4-201ENST00000320081 Q6ZSR3 168 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 CHCHD1Q96BP2 118 aaKnown RBP13.09□□□□□ -0.31
CLIP4-201ENST00000320081 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
CLIP4-201ENST00000320081 LY96Q9Y6Y9 160 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 TRGV2A0A075B6R0 118 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 ZNF815PA8K554 130 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 ST20Q9HBF5 79 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 DNAH14Q0VDD8 3507 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 SHISA9B4DS77 424 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 ITGB1BP1O14713 200 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 PPP1R17O96001 155 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 OR2K2Q8NGT1 345 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 NRGNQ92686 78 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 DSCAMO60469 2012 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
CLIP4-201ENST00000320081 TRAV12-2A0A075B6T6 113 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 TRAV2A0A0B4J234 112 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 IGKCP01834 107 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 DEFB1P60022 68 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 SRSF1Q07955 248 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLIP4-201ENST00000320081 PATE2Q6UY27 113 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 A0A1B0GW15 77 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 LINC00173Q6ZV60 143 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 ZNF295-AS1Q8N0V1 137 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 YAE1D1Q9NRH1 226 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 C1orf229Q6ZS94 237 aaPredicted RBP13.08□□□□□ -0.32
CLIP4-201ENST00000320081 OR13C6PQ8NH95 151 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 TMEM131Q92545 1883 aa13.08□□□□□ -0.32
CLIP4-201ENST00000320081 RNF223E7ERA6 249 aa13.07□□□□□ -0.32
CLIP4-201ENST00000320081 PF4P02776 101 aa13.07□□□□□ -0.32
CLIP4-201ENST00000320081 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
CLIP4-201ENST00000320081 TCF15Q12870 199 aa13.07□□□□□ -0.32
CLIP4-201ENST00000320081 MSRB2Q9Y3D2 182 aa13.07□□□□□ -0.32
CLIP4-201ENST00000320081 ZNF876PQ49A33 203 aa13.07□□□□□ -0.32
CLIP4-201ENST00000320081 VCX2Q9H322 139 aa13.07□□□□□ -0.32
CLIP4-201ENST00000320081 TMEM95Q3KNT9 176 aa13.07□□□□□ -0.32
CLIP4-201ENST00000320081 GATA1P15976 413 aaPredicted RBP13.06□□□□□ -0.32
CLIP4-201ENST00000320081 Q0VG73 95 aa13.06□□□□□ -0.32
CLIP4-201ENST00000320081 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
CLIP4-201ENST00000320081 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
CLIP4-201ENST00000320081 LHBP01229 141 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 PPBPP02775 128 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 IGLC2P0DOY2 106 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 IGLC3P0DOY3 106 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 MINOS1Q5TGZ0 78 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 PRSS22Q9GZN4 317 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 MINOS1-NBL1R4GNA1 71 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 EML5Q05BV3 1969 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 M0R1W7 72 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 PHLDA1Q8WV24 401 aaPredicted RBP13.05□□□□□ -0.32
CLIP4-201ENST00000320081 CHTOPQ9Y3Y2 248 aaKnown RBP13.05□□□□□ -0.32
CLIP4-201ENST00000320081 TNFRSF6BO95407 300 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 COX6CP09669 75 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 MSRB1Q9NZV6 116 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 KLK9Q9UKQ9 250 aa13.05□□□□□ -0.32
CLIP4-201ENST00000320081 IGKV1-17P01599 117 aa13.04□□□□□ -0.32
CLIP4-201ENST00000320081 PRR25Q96S07 402 aa13.04□□□□□ -0.32
CLIP4-201ENST00000320081 MRPL27Q9P0M9 148 aaKnown RBP13.04□□□□□ -0.32
CLIP4-201ENST00000320081 IGHV1-24A0A0C4DH33 117 aa13.04□□□□□ -0.32
CLIP4-201ENST00000320081 A0A1B0GV72 72 aa13.04□□□□□ -0.32
CLIP4-201ENST00000320081 CSTL1Q9H114 145 aa13.04□□□□□ -0.32
CLIP4-201ENST00000320081 NSUN5P1Q3KNT7 163 aa13.04□□□□□ -0.32
CLIP4-201ENST00000320081 FNDC10F2Z333 226 aa13.03□□□□□ -0.32
CLIP4-201ENST00000320081 LAGE3Q14657 143 aa13.03□□□□□ -0.32
CLIP4-201ENST00000320081 C11orf52Q96A22 123 aa13.03□□□□□ -0.32
CLIP4-201ENST00000320081 RNF5Q99942 180 aa13.03□□□□□ -0.32
CLIP4-201ENST00000320081 NPYP01303 97 aa13.03□□□□□ -0.32
CLIP4-201ENST00000320081 MGAQ8IWI9 3026 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms