RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GAGE12FP0CL80 117 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 GAGE12GP0CL81 117 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 GAGE12IP0CL82 117 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 H2BFSP57053 126 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 DAZ2Q13117 558 aaKnown RBP12.44□□□□□ -0.42
TPM1-203ENST00000317516 TMEM78Q5T7P6 136 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 ZNF680Q8NEM1 530 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 SCGB1C1Q8TD33 95 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 RNF141Q8WVD5 230 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 GNPNAT1Q96EK6 184 aaPredicted RBP12.44□□□□□ -0.42
TPM1-203ENST00000317516 FAM167A-AS1Q96KT0 104 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 ATP5SQ99766 215 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 PAXXQ9BUH6 204 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 FUT9Q9Y231 359 aa12.44□□□□□ -0.42
TPM1-203ENST00000317516 A0A1B0GVY2 172 aa12.43□□□□□ -0.42
TPM1-203ENST00000317516 KLLNB2CW77 178 aa12.43□□□□□ -0.42
TPM1-203ENST00000317516 IFNA5P01569 189 aa12.43□□□□□ -0.42
TPM1-203ENST00000317516 GPX1P07203 203 aa12.43□□□□□ -0.42
TPM1-203ENST00000317516 M6PRP20645 277 aa12.43□□□□□ -0.42
TPM1-203ENST00000317516 FAM122CQ6P4D5 195 aa12.43□□□□□ -0.42
TPM1-203ENST00000317516 LINC00467Q9BRT7 94 aa12.43□□□□□ -0.42
TPM1-203ENST00000317516 MPC2O95563 127 aa12.42□□□□□ -0.42
TPM1-203ENST00000317516 CRISP2P16562 243 aa12.42□□□□□ -0.42
TPM1-203ENST00000317516 RNASE4P34096 147 aaKnown RBP12.42□□□□□ -0.42
TPM1-203ENST00000317516 CSN1S1P47710 185 aa12.42□□□□□ -0.42
TPM1-203ENST00000317516 ZNF503Q96F45 646 aa12.42□□□□□ -0.42
TPM1-203ENST00000317516 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
TPM1-203ENST00000317516 DNAH6Q9C0G6 4158 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 TRAV26-1A0A087WT03 109 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 OR7C2O60412 319 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 ZNF324O75467 553 aaPredicted RBP12.41□□□□□ -0.42
TPM1-203ENST00000317516 OR10J4P0C629 311 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 RPL12P30050 165 aaKnown RBP12.41□□□□□ -0.42
TPM1-203ENST00000317516 ANXA2RQ3ZCQ2 193 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 EIF4E3Q8N5X7 224 aaKnown RBP12.41□□□□□ -0.42
TPM1-203ENST00000317516 ZNRF2Q8NHG8 242 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 RXFP4Q8TDU9 374 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 HSPB11Q9Y547 144 aa12.41□□□□□ -0.42
TPM1-203ENST00000317516 TRGV2A0A075B6R0 118 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.42
TPM1-203ENST00000317516 H3BNG1 76 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 IGKV2D-40P01614 121 aaPredicted RBP12.4□□□□□ -0.42
TPM1-203ENST00000317516 TAS2R45P59539 299 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 CD300CQ08708 224 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 BTN1A1Q13410 526 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 FFAR4Q5NUL3 377 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 FXYD5Q96DB9 178 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 LINC00588Q9Y4M8 146 aa12.4□□□□□ -0.42
TPM1-203ENST00000317516 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
TPM1-203ENST00000317516 NBDYA0A0U1RRE5 68 aa12.39□□□□□ -0.43
TPM1-203ENST00000317516 RGS13O14921 159 aa12.39□□□□□ -0.43
TPM1-203ENST00000317516 RANP62826 216 aaKnown RBP12.39□□□□□ -0.43
TPM1-203ENST00000317516 Q6ZTI0 123 aa12.39□□□□□ -0.43
TPM1-203ENST00000317516 SSX7Q7RTT5 188 aa12.39□□□□□ -0.43
TPM1-203ENST00000317516 VGLL1Q99990 258 aa12.39□□□□□ -0.43
TPM1-203ENST00000317516 BATF3Q9NR55 127 aa12.39□□□□□ -0.43
TPM1-203ENST00000317516 A0A0J9YY99 117 aa12.38□□□□□ -0.43
TPM1-203ENST00000317516 ZNF138P52744 262 aa12.38□□□□□ -0.43
TPM1-203ENST00000317516 KHDC3LQ587J8 217 aa12.38□□□□□ -0.43
TPM1-203ENST00000317516 ZFAND2AQ8N6M9 145 aa12.38□□□□□ -0.43
TPM1-203ENST00000317516 C18orf15Q96N68 181 aa12.38□□□□□ -0.43
TPM1-203ENST00000317516 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
TPM1-203ENST00000317516 TRGV1A0A0A0MS02 117 aa12.37□□□□□ -0.43
TPM1-203ENST00000317516 RBAKDNA6NC62 111 aa12.37□□□□□ -0.43
TPM1-203ENST00000317516 HOXA5P20719 270 aa12.37□□□□□ -0.43
TPM1-203ENST00000317516 UBE2L3P68036 154 aaKnown RBP12.37□□□□□ -0.43
TPM1-203ENST00000317516 IBA57Q5T440 356 aaKnown RBP12.37□□□□□ -0.43
TPM1-203ENST00000317516 C11orf72Q8NBR9 251 aa12.37□□□□□ -0.43
TPM1-203ENST00000317516 PHYHIPLQ96FC7 376 aa12.37□□□□□ -0.43
TPM1-203ENST00000317516 ARPC5LQ9BPX5 153 aa12.37□□□□□ -0.43
TPM1-203ENST00000317516 Q9H8V8 135 aa12.37□□□□□ -0.43
TPM1-203ENST00000317516 MBD2Q9UBB5 411 aa12.37□□□□□ -0.43
TPM1-203ENST00000317516 IGHV1OR15-1A0A075B7D0 117 aa12.36□□□□□ -0.43
TPM1-203ENST00000317516 MED14OSP0DP75 135 aa12.36□□□□□ -0.43
TPM1-203ENST00000317516 TCL1AP56279 114 aa12.36□□□□□ -0.43
TPM1-203ENST00000317516 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
TPM1-203ENST00000317516 Q9H3A6 140 aa12.36□□□□□ -0.43
TPM1-203ENST00000317516 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
TPM1-203ENST00000317516 HECTD4Q9Y4D8 3996 aa12.35□□□□□ -0.43
TPM1-203ENST00000317516 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
TPM1-203ENST00000317516 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
TPM1-203ENST00000317516 FAM74A1Q5RGS3 127 aa12.35□□□□□ -0.43
TPM1-203ENST00000317516 SPINK4O60575 86 aa12.34□□□□□ -0.43
TPM1-203ENST00000317516 TTC32Q5I0X7 151 aa12.34□□□□□ -0.43
TPM1-203ENST00000317516 CMTM2Q8TAZ6 248 aa12.34□□□□□ -0.43
TPM1-203ENST00000317516 KLF12Q9Y4X4 402 aa12.34□□□□□ -0.43
TPM1-203ENST00000317516 LENEPQ9Y5L5 61 aa12.34□□□□□ -0.43
TPM1-203ENST00000317516 ZNF266Q14584 549 aa12.33□□□□□ -0.44
TPM1-203ENST00000317516 PQLC2Q6ZP29 291 aa12.33□□□□□ -0.44
TPM1-203ENST00000317516 Q8TAT8 98 aa12.33□□□□□ -0.44
TPM1-203ENST00000317516 DIRC3C9JPN6 131 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 ZNF415Q09FC8 603 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 SLAQ13239 276 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 ESRGQ1W209 222 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 PRR9Q5T870 116 aa12.32□□□□□ -0.44
TPM1-203ENST00000317516 ST6GAL2Q96JF0 529 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms