RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 LOXL3P58215 753 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 EBLN2Q6P2I7 272 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 FLVCR1-AS1Q8TAF5 88 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 PHF7Q9BWX1 381 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-201ENST00000317147 LSM4Q9Y4Z0 139 aaKnown RBP3.69□□□□□ -1.82
CNOT1-201ENST00000317147 MUC22E2RYF6 1773 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-201ENST00000317147 IGHV3-13P01766 116 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 IGHV4-34P06331 123 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 CCL2P13500 99 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 ETDBQ3ZM63 59 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 ZC2HC1BQ5TFG8 222 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 ZNF114Q8NC26 417 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 PSG8Q9UQ74 426 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 NPIPB5A8MRT5 1133 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 M0R1B8 84 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 TFF2Q03403 129 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 C20orf173Q96LM9 149 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 TM2D2Q9BX73 214 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 CFHR2P36980 270 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 CTRLP40313 264 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 FAM159AQ6UWV7 190 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 NPIPB3Q92617 1050 aa3.69□□□□□ -1.82
CNOT1-201ENST00000317147 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 AGFG2O95081 481 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 SAA2P0DJI9 122 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-201ENST00000317147 MRPL53Q96EL3 112 aaKnown RBP3.68□□□□□ -1.82
CNOT1-201ENST00000317147 LINC00477Q96M19 166 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 ZNF747Q9BV97 191 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 COLQQ9Y215 455 aaPredicted RBP3.68□□□□□ -1.82
CNOT1-201ENST00000317147 MYOD1P15172 320 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 EGR1P18146 543 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 PDE6GP18545 87 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 C9orf139Q6ZV77 190 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 THAP8Q8NA92 274 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 UCN2Q96RP3 112 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 K7ERS5 55 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 UQCRQO14949 82 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 FOXC1Q12948 553 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 TMEM219Q86XT9 240 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 C15orf53Q8NAA6 179 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 SELENOKQ9Y6D0 94 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 TRGV11A0A075B6L2 103 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 NPPCP23582 126 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 RHOHQ15669 191 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 Q6ZS52 159 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 ZNF576Q9H609 170 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 M0R381 172 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 CCL3P10147 92 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 C8orf86Q6ZUL3 223 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 ABHD12Q8N2K0 398 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 C11orf1Q9H5F2 150 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 C21orf62Q9NYP8 219 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 RPUSD1Q9UJJ7 312 aaKnown RBP3.68□□□□□ -1.82
CNOT1-201ENST00000317147 HILPDAQ9Y5L2 63 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 IGKV1D-8A0A087WSZ0 117 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 IGHV3-43A0A0B4J1X8 118 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 TAX1BP3O14907 124 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 ZNF883P0CG24 379 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 IGHV3-43DP0DP04 118 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 FOXI1Q12951 378 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 Q6P435 159 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 VSIG2Q96IQ7 327 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 IGKV1D-43A0A0B4J1Z2 117 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 LEPROTO15243 131 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 CD55P08174 381 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 PAX9P55771 341 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 HAPLN4Q86UW8 402 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 ZNRF1Q8ND25 227 aa3.68□□□□□ -1.82
CNOT1-201ENST00000317147 SAA1P0DJI8 122 aaPredicted RBP3.67□□□□□ -1.82
CNOT1-201ENST00000317147 NPC2P61916 151 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 FAM106AQ4KMX7 169 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 PRR30Q53SZ7 412 aaPredicted RBP3.67□□□□□ -1.82
CNOT1-201ENST00000317147 LYZL4Q96KX0 146 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 VKORC1Q9BQB6 163 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 SHANK2-AS3Q9BTD1 123 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 CRIM1Q9NZV1 1036 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 MRPS36P82909 103 aaKnown RBP3.67□□□□□ -1.82
CNOT1-201ENST00000317147 DMRTC2Q8IXT2 367 aaPredicted RBP3.67□□□□□ -1.82
CNOT1-201ENST00000317147 VSIRQ9H7M9 311 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 NDUFC1O43677 76 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 PF4P02776 101 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 MGPP08493 103 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 ZNF474Q6S9Z5 364 aaPredicted RBP3.67□□□□□ -1.82
CNOT1-201ENST00000317147 PPP1R32Q7Z5V6 425 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 ST6GALNAC6Q969X2 333 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 HS3ST6Q96QI5 342 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 hDV102S1A0JD36 115 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 UNQ6494/PRO21346Q6UXR6 183 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 PKD1L1Q8TDX9 2849 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 A0A087WX48 190 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 TEX48A0A1B0GUV7 120 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 COX6A1P12074 109 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 NDUFV3P56181 108 aaKnown RBP3.67□□□□□ -1.82
CNOT1-201ENST00000317147 LCN12Q6JVE5 192 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 RNF144BQ7Z419 303 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 LINC00311Q8N616 119 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 FDCSPQ8NFU4 85 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 TTTY12Q9BZ98 90 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 TMEM213A2RRL7 107 aa3.67□□□□□ -1.82
CNOT1-201ENST00000317147 B9A039 149 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms