RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 IGFL4Q6B9Z1 124 aa10.66□□□□□ -0.7
VAMP2-201ENST00000316509 Q71RC1 249 aaPredicted RBP10.66□□□□□ -0.7
VAMP2-201ENST00000316509 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
VAMP2-201ENST00000316509 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
VAMP2-201ENST00000316509 VPREB3Q9UKI3 123 aa10.66□□□□□ -0.7
VAMP2-201ENST00000316509 PRAC2D3DTV9 90 aa10.65□□□□□ -0.7
VAMP2-201ENST00000316509 ZNF705DP0CH99 300 aaPredicted RBP10.65□□□□□ -0.7
VAMP2-201ENST00000316509 ZNF705BP0CI00 300 aaPredicted RBP10.65□□□□□ -0.7
VAMP2-201ENST00000316509 DDTP30046 118 aa10.65□□□□□ -0.7
VAMP2-201ENST00000316509 FOXE3Q13461 319 aa10.65□□□□□ -0.7
VAMP2-201ENST00000316509 Q5PR19 223 aa10.65□□□□□ -0.7
VAMP2-201ENST00000316509 LYZL1Q6UWQ5 148 aa10.65□□□□□ -0.7
VAMP2-201ENST00000316509 Q6ZS46 218 aa10.65□□□□□ -0.7
VAMP2-201ENST00000316509 IGHV7-4-1A0A0J9YVY3 117 aa10.65□□□□□ -0.71
VAMP2-201ENST00000316509 IGLC6P0CF74 106 aa10.65□□□□□ -0.71
VAMP2-201ENST00000316509 UNQ9165/PRO28630Q6UXU0 137 aa10.65□□□□□ -0.71
VAMP2-201ENST00000316509 TEX43Q6ZNM6 134 aa10.65□□□□□ -0.71
VAMP2-201ENST00000316509 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.71
VAMP2-201ENST00000316509 MYO18BQ8IUG5 2567 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 OR5AL1P0C617 328 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 ZNF80P51504 273 aaPredicted RBP10.64□□□□□ -0.71
VAMP2-201ENST00000316509 DEFA6Q01524 100 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 ERCC8Q13216 396 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 RNF182Q8N6D2 247 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 Q8TAT8 98 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 CNFNQ9BYD5 112 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 DAZ1Q9NQZ3 744 aaKnown RBP10.64□□□□□ -0.71
VAMP2-201ENST00000316509 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
VAMP2-201ENST00000316509 IGHV3OR16-13A0A075B7E8 117 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 IGHV3-74A0A0B4J1X5 117 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 IGHV3-11P01762 117 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 ELANEP08246 267 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 LINC00614P0C842 121 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 KRTAP10-9P60411 292 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 IGHV3-49A0A0A0MS15 119 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 SOCS3O14543 225 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 SMAD7O15105 426 aaKnown RBP10.63□□□□□ -0.71
VAMP2-201ENST00000316509 ORM1P02763 201 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 SMPXQ9UHP9 88 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 U3KQK5 164 aa10.63□□□□□ -0.71
VAMP2-201ENST00000316509 M0R2Z0 102 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 FAM104BQ5XKR9 115 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
VAMP2-201ENST00000316509 IL17RELQ6ZVW7 336 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 REC114Q7Z4M0 266 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 PRO1933Q9H354 126 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 USP9XQ93008 2570 aaPredicted RBP10.62□□□□□ -0.71
VAMP2-201ENST00000316509 PLA2G2AP14555 144 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 KRTDAPP60985 99 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 OR10J6PQ8NGY7 276 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 RHPN1-AS1Q9BWJ2 59 aa10.62□□□□□ -0.71
VAMP2-201ENST00000316509 AKAP6Q13023 2319 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 FLNCQ14315 2725 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 KIR2DL5BA0A0G2JN68 375 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 KIR2DL5BA0A0G2JPC4 375 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 NTF3P20783 257 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 KIR2DL5AQ8N109 375 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 ZNF738Q8NE65 137 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 PSMG3-AS1Q96PY0 264 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 C20orf144Q9BQM9 153 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 TPPP3Q9BW30 176 aa10.61□□□□□ -0.71
VAMP2-201ENST00000316509 TMSB15BA0A087X1C1 80 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 PMCHL1Q16048 86 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 FAM19A2Q8N3H0 131 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 RNF152Q8N8N0 203 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 URB1-AS1Q96HZ7 61 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 Q96MF0 132 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 J3QKU1 62 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 C3orf79P0CE67 100 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 ID1P41134 155 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 TMEM86BQ8N661 226 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 MYOZ3Q8TDC0 251 aa10.6□□□□□ -0.71
VAMP2-201ENST00000316509 FAM181BA6NEQ2 426 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 PPBPP02775 128 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 BTF3P20290 206 aaKnown RBP10.59□□□□□ -0.71
VAMP2-201ENST00000316509 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 Q8N976 141 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 MAPK1IP1LQ8NDC0 245 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 NDUFAF3Q9BU61 184 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 VAMP8Q9BV40 100 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 UBR5O95071 2799 aaPredicted RBP10.59□□□□□ -0.71
VAMP2-201ENST00000316509 SPTAN1Q13813 2472 aaKnown RBP10.59□□□□□ -0.71
VAMP2-201ENST00000316509 LGALS9O00182 355 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 TWIST1Q15672 202 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 ORMDL3Q8N138 153 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 Q8N2B8 174 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 LAMTOR2Q9Y2Q5 125 aa10.59□□□□□ -0.71
VAMP2-201ENST00000316509 PRB4P10163 310 aaPredicted RBP10.58□□□□□ -0.72
VAMP2-201ENST00000316509 LBHQ53QV2 105 aaPredicted RBP10.58□□□□□ -0.72
VAMP2-201ENST00000316509 TM4SF20Q53R12 229 aa10.58□□□□□ -0.72
VAMP2-201ENST00000316509 C20orf173Q96LM9 149 aa10.58□□□□□ -0.72
VAMP2-201ENST00000316509 UBE2E2Q96LR5 201 aa10.58□□□□□ -0.72
VAMP2-201ENST00000316509 ZNF702PQ9H963 129 aa10.58□□□□□ -0.72
VAMP2-201ENST00000316509 LGALS1P09382 135 aaKnown RBP10.58□□□□□ -0.72
VAMP2-201ENST00000316509 CD33P20138 364 aa10.58□□□□□ -0.72
VAMP2-201ENST00000316509 CACNG7P62955 275 aa10.58□□□□□ -0.72
VAMP2-201ENST00000316509 KRTAP1-3Q8IUG1 177 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms