RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 BAALCQ8WXS3 180 aa7.11□□□□□ -1.27
USF3-201ENST00000316407 NDUFC2O95298 119 aa7.11□□□□□ -1.27
USF3-201ENST00000316407 DAD1P61803 113 aa7.11□□□□□ -1.27
USF3-201ENST00000316407 LHFPL1Q86WI0 220 aa7.11□□□□□ -1.27
USF3-201ENST00000316407 WIPF2Q8TF74 440 aaPredicted RBP7.11□□□□□ -1.27
USF3-201ENST00000316407 A0A0G2JRQ6 117 aa7.11□□□□□ -1.27
USF3-201ENST00000316407 NHSL1Q5SYE7 1610 aa7.11□□□□□ -1.27
USF3-201ENST00000316407 C20orf204Q6ZNR8 217 aa7.11□□□□□ -1.27
USF3-201ENST00000316407 METRNQ9UJH8 293 aa7.11□□□□□ -1.27
USF3-201ENST00000316407 KLRD1Q13241 179 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 CLPSL2Q6UWE3 100 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 LINC00114Q6XXX2 140 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 IGHV2-70DA0A0C4DH43 119 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 PEMTQ9UBM1 199 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 NXPH4O95158 308 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 LINC00271P0C7V0 271 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 GFRA4Q9GZZ7 299 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 C15orf62A8K5M9 175 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 IGKV1-12A0A0C4DH73 117 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 MMP23AO75900 390 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 IGKV1D-12P01611 117 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 SMIM10L1P0DMW3 83 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 TMEM14EPQ6UXP3 125 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 SMIM10Q96HG1 83 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 LIME1Q9H400 295 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 C7orf69Q9H7B7 122 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 SIGLEC8Q9NYZ4 499 aa7.1□□□□□ -1.27
USF3-201ENST00000316407 KNCNA6PVL3 124 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 OVOL1O14753 267 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 UTF1Q5T230 341 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 COX6B1P14854 86 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 C12orf74Q32Q52 190 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 LY6G5BQ8NDX9 201 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 TRGV9Q99603 122 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 FAM208BQ5VWN6 2430 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 THAP8Q8NA92 274 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 C1orf162Q8NEQ5 155 aaPredicted RBP7.09□□□□□ -1.27
USF3-201ENST00000316407 NTN5Q8WTR8 489 aaPredicted RBP7.09□□□□□ -1.27
USF3-201ENST00000316407 IGHV4-28A0A0C4DH34 117 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 C2orf66Q6UXQ4 117 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 UBE2E2Q96LR5 201 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 MSRB2Q9Y3D2 182 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 V9GYV3 84 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 SPSB3Q6PJ21 355 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 KLK9Q9UKQ9 250 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 ATG2AQ2TAZ0 1938 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 IGHV3-38A0A0C4DH36 116 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 MLANAQ16655 118 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 FAM168AQ92567 244 aa7.09□□□□□ -1.27
USF3-201ENST00000316407 CRYGCP07315 174 aa7.09□□□□□ -1.28
USF3-201ENST00000316407 FAM90A1Q86YD7 464 aa7.09□□□□□ -1.28
USF3-201ENST00000316407 SPTSSBQ8NFR3 76 aa7.09□□□□□ -1.28
USF3-201ENST00000316407 TECTAO75443 2155 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 RPL36AP83881 106 aaKnown RBP7.08□□□□□ -1.28
USF3-201ENST00000316407 FOXF2Q12947 444 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 RPL36ALQ969Q0 106 aaKnown RBP7.08□□□□□ -1.28
USF3-201ENST00000316407 EFNA4P52798 201 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 EIF4EBP2Q13542 120 aaPredicted RBP7.08□□□□□ -1.28
USF3-201ENST00000316407 NDUFA12Q9UI09 145 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 DEFB130BP0DP73 79 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 DEFB130AP0DP74 79 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 RNASE2P10153 161 aaKnown RBP7.08□□□□□ -1.28
USF3-201ENST00000316407 EFNA2O43921 213 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 SMIM27A0A1W2PRY6 76 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 LYL1P12980 280 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 LY96Q9Y6Y9 160 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 SS18Q15532 418 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 NRN1LQ496H8 165 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 C10orf91Q5T1B1 145 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 H0YJW9 148 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 DUX4L9Q6RFH8 374 aaPredicted RBP7.08□□□□□ -1.28
USF3-201ENST00000316407 NOTCH4Q99466 2003 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 Q6ZRM9 215 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 PSPNO60542 156 aa7.08□□□□□ -1.28
USF3-201ENST00000316407 NEU4Q8WWR8 484 aaPredicted RBP7.08□□□□□ -1.28
USF3-201ENST00000316407 DTX2Q86UW9 622 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 SCRT2Q9NQ03 307 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 SMRP1Q8NCR6 262 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 DEFB105AQ8NG35 78 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 ZNRD1Q9P1U0 126 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 IGLV3-21P80748 117 aaPredicted RBP7.07□□□□□ -1.28
USF3-201ENST00000316407 TMEM200BQ69YZ2 307 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 FAM104BQ5XKR9 115 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 TMEM75Q8N9X5 138 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 MPLKIPQ8TAP9 179 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 I3L3M4 83 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 IL18BPO95998 194 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 SLX1AQ9BQ83 275 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 ZNF493Q6ZR52 646 aa7.07□□□□□ -1.28
USF3-201ENST00000316407 LYPD3O95274 346 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 QRFPP83859 136 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 WFDC2Q14508 124 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 HS3ST6Q96QI5 342 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 NDUFS7O75251 213 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 DUSP14O95147 198 aaKnown RBP7.06□□□□□ -1.28
USF3-201ENST00000316407 TRPT1Q86TN4 253 aaKnown RBP7.06□□□□□ -1.28
USF3-201ENST00000316407 PNRC2Q9NPJ4 139 aaKnown RBP7.06□□□□□ -1.28
USF3-201ENST00000316407 FBLN5Q9UBX5 448 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 C2CD3Q4AC94 2353 aa7.06□□□□□ -1.28
USF3-201ENST00000316407 CT83Q5H943 113 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms