RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 CST9LQ9H4G1 147 aa10.58□□□□□ -0.72
PCDHB9-201ENST00000316105 IGKV1D-37A0A075B6S9 117 aa10.58□□□□□ -0.72
PCDHB9-201ENST00000316105 TRAV21A0A0B4J279 112 aa10.58□□□□□ -0.72
PCDHB9-201ENST00000316105 TSPOP30536 169 aa10.58□□□□□ -0.72
PCDHB9-201ENST00000316105 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
PCDHB9-201ENST00000316105 TNRC6BQ9UPQ9 1833 aaKnown RBP10.58□□□□□ -0.72
PCDHB9-201ENST00000316105 SMKR1H3BMG3 65 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 SMAD7O15105 426 aaKnown RBP10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 DUX5Q96PT3 197 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 GAGE12BA1L429 117 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 ZNF56Q15929 161 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 MPV17L2Q567V2 206 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 C9orf139Q6ZV77 190 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 RPL13AP40429 203 aaKnown RBP10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 hDV102S1A0JD36 115 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 SYS1-DBNDD2H3BUS1 97 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 MSMBP08118 114 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 SRSF9Q13242 221 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 IFI27L1Q96BM0 104 aa10.57□□□□□ -0.72
PCDHB9-201ENST00000316105 DGAT2L7PQ6IED9 249 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 PRR25Q96S07 402 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 NAA38Q9BRA0 125 aaKnown RBP10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 NXT2Q9NPJ8 142 aaKnown RBP10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 OVOL1O14753 267 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 ATP5LO75964 103 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 NPBQ8NG41 125 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 LOC107984156A0A0G2JMH3 177 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 ARL17AQ8IVW1 177 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 OR2K2Q8NGT1 345 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 PRSS22Q9GZN4 317 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 GTSF1LQ9H1H1 148 aa10.56□□□□□ -0.72
PCDHB9-201ENST00000316105 IGHV7-81A0A0B4J1V7 117 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 CRYGCP07315 174 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 ZFP36P26651 326 aaKnown RBP10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 PCSK5Q92824 1860 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 HLA-DMBP28068 263 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 DSCR9P59020 149 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 KIR2DL4Q99706 377 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 IGLV11-55A0A075B6I3 123 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 DNAH14Q0VDD8 3507 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 IGHV3OR16-12A0A075B7B8 117 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 OVOL3O00110 214 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 CD7P09564 240 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 SMIM13P0DJ93 91 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 MAPK1IP1LQ8NDC0 245 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 USMG5Q96IX5 58 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 VGLL1Q99990 258 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 ST20Q9HBF5 79 aa10.55□□□□□ -0.72
PCDHB9-201ENST00000316105 PAX1P15863 534 aa10.54□□□□□ -0.72
PCDHB9-201ENST00000316105 RNASE8Q8TDE3 154 aaKnown RBP10.54□□□□□ -0.72
PCDHB9-201ENST00000316105 ANKRD39Q53RE8 183 aa10.54□□□□□ -0.72
PCDHB9-201ENST00000316105 SCGB3A1Q96QR1 104 aa10.54□□□□□ -0.72
PCDHB9-201ENST00000316105 IL17RELQ6ZVW7 336 aa10.54□□□□□ -0.72
PCDHB9-201ENST00000316105 RHPN1-AS1Q9BWJ2 59 aa10.54□□□□□ -0.72
PCDHB9-201ENST00000316105 LAMA1P25391 3075 aa10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 PSMG4Q5JS54 123 aa10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 STPG4Q8N801 248 aa10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 PSMB2P49721 201 aa10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 DTX2Q86UW9 622 aa10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 A0A1B0GWB2 263 aa10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 CDKN1BP46527 198 aa10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 WIPF2Q8TF74 440 aaPredicted RBP10.53□□□□□ -0.72
PCDHB9-201ENST00000316105 HIVEP3Q5T1R4 2406 aa10.52□□□□□ -0.72
PCDHB9-201ENST00000316105 C8orf86Q6ZUL3 223 aa10.52□□□□□ -0.72
PCDHB9-201ENST00000316105 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.73
PCDHB9-201ENST00000316105 CENPVL3A0A0U1RRI6 287 aa10.52□□□□□ -0.73
PCDHB9-201ENST00000316105 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.52□□□□□ -0.73
PCDHB9-201ENST00000316105 Q8N9W7 124 aa10.52□□□□□ -0.73
PCDHB9-201ENST00000316105 FAM104BQ5XKR9 115 aa10.52□□□□□ -0.73
PCDHB9-201ENST00000316105 Q6ZVH6 145 aa10.52□□□□□ -0.73
PCDHB9-201ENST00000316105 ITLN2Q8WWU7 325 aaPredicted RBP10.52□□□□□ -0.73
PCDHB9-201ENST00000316105 FCN3O75636 299 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 NDUFA3O95167 84 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 HIST1H4GQ99525 98 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 IGHV4-61A0A0C4DH41 118 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 PPP1R17O96001 155 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 CTSGP08311 255 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 TTC32Q5I0X7 151 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 LCNL1Q6ZST4 164 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 IGHV1-24A0A0C4DH33 117 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 C1orf159Q96HA4 380 aa10.51□□□□□ -0.73
PCDHB9-201ENST00000316105 CKS1BP61024 79 aa10.5□□□□□ -0.73
PCDHB9-201ENST00000316105 OR1N2Q8NGR9 330 aa10.5□□□□□ -0.73
PCDHB9-201ENST00000316105 DAZ1Q9NQZ3 744 aaKnown RBP10.5□□□□□ -0.73
PCDHB9-201ENST00000316105 KLF12Q9Y4X4 402 aa10.5□□□□□ -0.73
PCDHB9-201ENST00000316105 IGLV2-8P01709 118 aa10.5□□□□□ -0.73
PCDHB9-201ENST00000316105 SLC25A16P16260 332 aa10.5□□□□□ -0.73
PCDHB9-201ENST00000316105 SRSF1Q07955 248 aaKnown RBP eCLIP10.5□□□□□ -0.73
PCDHB9-201ENST00000316105 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms