RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 PRAC2D3DTV9 90 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 H3BMM0 161 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 TAAR5O14804 337 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 BCL2L11O43521 198 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 CA1P00915 261 aaPredicted RBP5.77□□□□□ -1.49
CDC42-201ENST00000315554 C1QBP02746 253 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 HIST1H1EP10412 219 aaKnown RBP5.77□□□□□ -1.49
CDC42-201ENST00000315554 HLA-DRB4P13762 266 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 C4BPBP20851 252 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 APOC4P55056 127 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 UBE2L3P68036 154 aaKnown RBP5.77□□□□□ -1.49
CDC42-201ENST00000315554 ZNF345Q14585 488 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 LGALSLQ3ZCW2 172 aaPredicted RBP5.77□□□□□ -1.49
CDC42-201ENST00000315554 LCN15Q6UWW0 184 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 SSX7Q7RTT5 188 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 EXOC3-AS1Q8N2X6 119 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 FXYD5Q96DB9 178 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 GNPNAT1Q96EK6 184 aaPredicted RBP5.77□□□□□ -1.49
CDC42-201ENST00000315554 RCHY1Q96PM5 261 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 SPATA25Q9BR10 227 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 PSMG3Q9BT73 122 aaPredicted RBP5.77□□□□□ -1.49
CDC42-201ENST00000315554 CSTL1Q9H114 145 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 ZNF331Q9NQX6 463 aaPredicted RBP5.77□□□□□ -1.49
CDC42-201ENST00000315554 RPRMQ9NS64 109 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 TMEM14CQ9P0S9 112 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 U3KQK5 164 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 HLA-DRB4X5D2U9 266 aa5.77□□□□□ -1.49
CDC42-201ENST00000315554 TENM3Q9P273 2699 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 AGRNO00468 2067 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 A0A0J9YX75 114 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 M0R3E3 92 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 JTBO76095 146 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 NDUFB4O95168 129 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 NHLRC4P0CG21 123 aaPredicted RBP5.76□□□□□ -1.49
CDC42-201ENST00000315554 SPP1P10451 314 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 NKX2-5P52952 324 aaPredicted RBP5.76□□□□□ -1.49
CDC42-201ENST00000315554 HIST1H1AQ02539 215 aaPredicted RBP5.76□□□□□ -1.49
CDC42-201ENST00000315554 PSG3Q16557 428 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 KHDC3LQ587J8 217 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 EBLN2Q6P2I7 272 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 FOXI2Q6ZQN5 318 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 RPP25LQ8N5L8 163 aaKnown RBP5.76□□□□□ -1.49
CDC42-201ENST00000315554 RPUSD4Q96CM3 377 aaKnown RBP5.76□□□□□ -1.49
CDC42-201ENST00000315554 PHYHIPLQ96FC7 376 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 SLC50A1Q9BRV3 221 aa5.76□□□□□ -1.49
CDC42-201ENST00000315554 NBEAL2Q6ZNJ1 2754 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 COL7A1Q02388 2944 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 TMEM238C9JI98 176 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 GIG44P09565 113 aaPredicted RBP5.75□□□□□ -1.49
CDC42-201ENST00000315554 NBEAP1P0C6P0 100 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 ARL14EPLP0DKL9 152 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 CNN1P51911 297 aaKnown RBP5.75□□□□□ -1.49
CDC42-201ENST00000315554 TAS2R45P59539 299 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 SERF2P84101 59 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 ICAM4Q14773 271 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 ZNF726P1Q15940 193 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 GUK1Q16774 197 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 ZFP69Q49AA0 526 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 AKR1C8PQ5T2L2 129 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 SAMD13Q5VXD3 122 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 OVOL2Q9BRP0 275 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 SLC35B3Q9H1N7 401 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 XCL2Q9UBD3 114 aa5.75□□□□□ -1.49
CDC42-201ENST00000315554 DNAH9Q9NYC9 4486 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 KIR2DL5BA0A0G2JN68 375 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 KIR2DL5BA0A0G2JPC4 375 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 PCP4L1A6NKN8 68 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 SPRY2O43597 315 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 FGF8P55075 233 aaPredicted RBP5.74□□□□□ -1.49
CDC42-201ENST00000315554 RANP62826 216 aaKnown RBP5.74□□□□□ -1.49
CDC42-201ENST00000315554 KIR2DL5AQ8N109 375 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 C9orf62Q8N4C0 152 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 OR8A1Q8NGG7 326 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 KIR2DL5BQ8NHK3 375 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 TMED6Q8WW62 240 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 HYLS1Q96M11 299 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 ACTR3CQ9C0K3 210 aaPredicted RBP5.74□□□□□ -1.49
CDC42-201ENST00000315554 X6R8D5 127 aa5.74□□□□□ -1.49
CDC42-201ENST00000315554 IGKV2-40A0A087WW87 121 aaPredicted RBP5.73□□□□□ -1.49
CDC42-201ENST00000315554 A0A1B0GV50 99 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 M0R2Z0 102 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 IGKV2D-40P01614 121 aaPredicted RBP5.73□□□□□ -1.49
CDC42-201ENST00000315554 GCHFRP30047 84 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 PSG9Q00887 426 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 ERCC8Q13216 396 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 SPINK13Q1W4C9 94 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 MORN3Q6PF18 240 aaPredicted RBP5.73□□□□□ -1.49
CDC42-201ENST00000315554 AMTNQ6UX39 209 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 BAP18Q8IXM2 172 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 RNF183Q96D59 192 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 Q9H3A6 140 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 TMPRSS5Q9H3S3 457 aa5.73□□□□□ -1.49
CDC42-201ENST00000315554 TRAV12-2A0A075B6T6 113 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 IGHV3OR16-12A0A075B7B8 117 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 CTXND1A0A1B0GTU2 59 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 DEFB4AO15263 64 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 ZNF253O75346 499 aa5.72□□□□□ -1.49
CDC42-201ENST00000315554 DUSP14O95147 198 aaKnown RBP5.72□□□□□ -1.49
CDC42-201ENST00000315554 TPT1P13693 172 aaKnown RBP5.72□□□□□ -1.49
CDC42-201ENST00000315554 PDE6HQ13956 83 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms