RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ALMS1Q8TCU4 4167 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 IGHV3-48P01763 117 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 OR5AL1P0C617 328 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 UBE2L3P68036 154 aaKnown RBP5.88□□□□□ -1.47
CNOT4-201ENST00000315544 PRR31Q5SQ13 230 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 Q6AWC8 147 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 FOXI2Q6ZQN5 318 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 C5orf56Q8N8D9 126 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 ZNF709Q8N972 641 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 A0A1W2PRD5 423 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 A0A1W2PRF3 423 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 A0A1W2PRM7 423 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 FHL3Q13643 280 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 PERPQ96FX8 193 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 PAM16Q9Y3D7 125 aa5.88□□□□□ -1.47
CNOT4-201ENST00000315544 IGLV4-69A0A075B6H9 119 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 hDV102S1A0JD36 115 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 IGHV4-31P0DP07 118 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 TAS2R45P59539 299 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 LTC4SQ16873 150 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 BAGE2Q86Y30 109 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 MSRB1Q9NZV6 116 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 TIMM23O14925 209 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 ZNF138P52744 262 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 TMEM108Q6UXF1 575 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 RAB9BQ9NP90 201 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 SERTM2A0A1B0GWG4 89 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 SLC25A16P16260 332 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 ERVK-16P61578 105 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 UNQ5815/PRO19632Q6UWF5 114 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 TMEM70Q9BUB7 260 aa5.87□□□□□ -1.47
CNOT4-201ENST00000315544 ACACAQ13085 2346 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 TRAV30A0A087WSZ9 112 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 OOSP1A8MZH6 123 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 KLLNB2CW77 178 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 SH2D1AO60880 128 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 MRPL54Q6P161 138 aaKnown RBP5.86□□□□□ -1.47
CNOT4-201ENST00000315544 ASCL2Q99929 193 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 PSG8Q9UQ74 426 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 TMEM213A2RRL7 107 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 C7orf71A4D174 169 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 NDUFS7O75251 213 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 NPYP01303 97 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 HLA-DMBP28068 263 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 ATOH7Q8N100 152 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 OR1N2Q8NGR9 330 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 CT45A10P0DMU9 189 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 RNASE3P12724 160 aaKnown RBP5.86□□□□□ -1.47
CNOT4-201ENST00000315544 IFI27P40305 119 aaPredicted RBP5.86□□□□□ -1.47
CNOT4-201ENST00000315544 SMCPP49901 116 aaPredicted RBP5.86□□□□□ -1.47
CNOT4-201ENST00000315544 LINC01560Q8TB33 94 aa5.86□□□□□ -1.47
CNOT4-201ENST00000315544 HIVEP1P15822 2718 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 NBASA2RRP1 2371 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 TRBV7-9A0A0J9YWB2 115 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 FAM110DQ8TAY7 271 aaPredicted RBP5.85□□□□□ -1.47
CNOT4-201ENST00000315544 RNF125Q96EQ8 232 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 LITAFQ99732 161 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 PTPN13Q12923 2485 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 IGHV4OR15-8A0A075B7B6 117 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 A0A087WW49 117 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 PMCHP20382 165 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 EFNA4P52798 201 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 TCL1AP56279 114 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 MPV17L2Q567V2 206 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 COL5A1-AS1Q5SY13 56 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 SIGLECL1Q8N7X8 197 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 MAPKAPK5-AS1Q8N8E1 139 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 LYNX1G3V0Z9 82 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 M0R3E3 92 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 LYNX1P0DP58 116 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 SDIM1Q6ZPB5 146 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 Q8N1Y9 231 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 GOLT1BQ9Y3E0 138 aa5.85□□□□□ -1.47
CNOT4-201ENST00000315544 IGIPA6NJ69 53 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 MED14OSP0DP75 135 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 RPL27AP46776 148 aaKnown RBP5.84□□□□□ -1.47
CNOT4-201ENST00000315544 PRIMA1Q86XR5 153 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 NEXN-AS1Q8NBZ9 246 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 ZNF256Q9Y2P7 627 aaPredicted RBP5.84□□□□□ -1.47
CNOT4-201ENST00000315544 C22orf24Q9Y442 160 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 ZNF25P17030 456 aaPredicted RBP5.84□□□□□ -1.47
CNOT4-201ENST00000315544 MINOS1Q5TGZ0 78 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 FAM19A3Q7Z5A8 133 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 DCANP1Q8TF63 244 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 VAMP8Q9BV40 100 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 MINOS1-NBL1R4GNA1 71 aa5.84□□□□□ -1.47
CNOT4-201ENST00000315544 FAM90A27PA6NNH2 459 aa5.84□□□□□ -1.48
CNOT4-201ENST00000315544 TRGV3P03979 118 aa5.84□□□□□ -1.48
CNOT4-201ENST00000315544 PSG9Q00887 426 aa5.84□□□□□ -1.48
CNOT4-201ENST00000315544 ETFRF1Q6IPR1 90 aa5.84□□□□□ -1.48
CNOT4-201ENST00000315544 RASL10AQ92737 203 aa5.84□□□□□ -1.48
CNOT4-201ENST00000315544 DNAH17Q9UFH2 4485 aa5.84□□□□□ -1.48
CNOT4-201ENST00000315544 NSD1Q96L73 2696 aaPredicted RBP5.83□□□□□ -1.48
CNOT4-201ENST00000315544 ZNF705GA8MUZ8 300 aaPredicted RBP5.83□□□□□ -1.48
CNOT4-201ENST00000315544 BPIFB3P59826 476 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 LYZL1Q6UWQ5 148 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 SMPXQ9UHP9 88 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 ITPR3Q14573 2671 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 CD7P09564 240 aa5.83□□□□□ -1.48
CNOT4-201ENST00000315544 PRB3Q04118 309 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms