RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 PSMG4Q5JS54 123 aa12□□□□□ -0.49
CGGBP1-201ENST00000309534 FSHBP01225 129 aa11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 DSPP15924 2871 aaKnown RBP11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 ERCC8Q13216 396 aa11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 C8orf49Q96NF6 230 aa11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 LGALS9O00182 355 aa11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 TRBV12-3P01733 135 aa11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 OR11H1Q8NG94 326 aa11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 MLST8Q9BVC4 326 aa11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 PHLDA3Q9Y5J5 127 aa11.99□□□□□ -0.49
CGGBP1-201ENST00000309534 C19orf54Q5BKX5 351 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 SYT8Q8NBV8 401 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 C4orf3Q8WVX3 66 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 VGLL1Q99990 258 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 A0A1W2PRX2 142 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 MRPS12O15235 138 aaKnown RBP11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 U3KQE9 123 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 GRIFINA4D1Z8 144 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 PF4P02776 101 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 UNQ9165/PRO28630Q6UXU0 137 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 OR8A1Q8NGG7 326 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 WFDC12Q8WWY7 111 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 PTPN13Q12923 2485 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
CGGBP1-201ENST00000309534 DMXL2Q8TDJ6 3036 aa11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 HSBP1L1C9JCN9 74 aa11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 CKS2P33552 79 aa11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 RNASE4P34096 147 aaKnown RBP11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 TCTEX1D4Q5JR98 221 aa11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 TMEM136Q6ZRR5 245 aa11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 TSSC4Q9Y5U2 329 aaPredicted RBP11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 M0R2Z0 102 aa11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 ZNF688P0C7X2 276 aa11.97□□□□□ -0.49
CGGBP1-201ENST00000309534 C19orf71A6NCJ1 209 aa11.96□□□□□ -0.49
CGGBP1-201ENST00000309534 HLA-DMBP28068 263 aa11.96□□□□□ -0.49
CGGBP1-201ENST00000309534 C9orf47Q6ZRZ4 202 aa11.96□□□□□ -0.49
CGGBP1-201ENST00000309534 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.49
CGGBP1-201ENST00000309534 LINC00518Q8N0U6 118 aa11.96□□□□□ -0.49
CGGBP1-201ENST00000309534 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.49
CGGBP1-201ENST00000309534 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 A0A087WW49 117 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 TCF21O43680 179 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 GZMBP10144 247 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 APOHP02749 345 aaPredicted RBP11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 KRTDAPP60985 99 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 Q6ZS46 218 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 TMEM160Q9NX00 188 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 RNF114Q9Y508 228 aa11.96□□□□□ -0.5
CGGBP1-201ENST00000309534 PPBPP02775 128 aa11.95□□□□□ -0.5
CGGBP1-201ENST00000309534 TMEM208Q9BTX3 173 aa11.95□□□□□ -0.5
CGGBP1-201ENST00000309534 SRSF2Q01130 221 aaKnown RBP11.95□□□□□ -0.5
CGGBP1-201ENST00000309534 Q0VG73 95 aa11.95□□□□□ -0.5
CGGBP1-201ENST00000309534 SMAD5-AS1Q9Y6J3 95 aa11.95□□□□□ -0.5
CGGBP1-201ENST00000309534 CLPSL1A2RUU4 121 aa11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 A8MWP6 167 aa11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 NUTF2P61970 127 aaKnown RBP11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 PRRC2AP48634 2157 aaKnown RBP11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 TRBV7-9A0A0J9YWB2 115 aa11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 A0A1B0GUS0 222 aa11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 CFHR3Q02985 330 aa11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 ORMDL3Q8N138 153 aa11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 MAP1LC3AQ9H492 121 aa11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 HSPB8Q9UJY1 196 aa11.94□□□□□ -0.5
CGGBP1-201ENST00000309534 CELSR3Q9NYQ7 3312 aa11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 CSN3P07498 182 aa11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 USP9XQ93008 2570 aaPredicted RBP11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 ANKRD17O75179 2603 aaKnown RBP11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 RNASE1P07998 156 aaKnown RBP11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 C11orf44Q8N8P7 122 aa11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 C2orf70A6NJV1 201 aa11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 PPP1R17O96001 155 aa11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 Q6ZSV7 163 aa11.93□□□□□ -0.5
CGGBP1-201ENST00000309534 PRELID3AQ96N28 172 aa11.92□□□□□ -0.5
CGGBP1-201ENST00000309534 MS4A6AQ9H2W1 248 aa11.92□□□□□ -0.5
CGGBP1-201ENST00000309534 FRYQ5TBA9 3013 aa11.92□□□□□ -0.5
CGGBP1-201ENST00000309534 SERF1AO75920 110 aa11.92□□□□□ -0.5
CGGBP1-201ENST00000309534 COA6Q5JTJ3 125 aaKnown RBP11.92□□□□□ -0.5
CGGBP1-201ENST00000309534 OR9G4Q8NGQ1 327 aa11.92□□□□□ -0.5
CGGBP1-201ENST00000309534 IGSF10Q6WRI0 2623 aa11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 IGKV3-20P01619 116 aa11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 TRGV11A0A075B6L2 103 aa11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 PRB4P10163 310 aaPredicted RBP11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 CHCHD1Q96BP2 118 aaKnown RBP11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 IGLV2-11P01706 119 aa11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 FOXA3P55318 350 aaPredicted RBP11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 Q8N2B8 174 aa11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 HIST1H2BLQ99880 126 aa11.91□□□□□ -0.5
CGGBP1-201ENST00000309534 NPIPB6E9PJ23 425 aa11.9□□□□□ -0.5
CGGBP1-201ENST00000309534 LINC01559Q495D7 138 aa11.9□□□□□ -0.5
CGGBP1-201ENST00000309534 FOXI2Q6ZQN5 318 aa11.9□□□□□ -0.5
CGGBP1-201ENST00000309534 USP9YO00507 2555 aaPredicted RBP11.9□□□□□ -0.5
CGGBP1-201ENST00000309534 OR5AL1P0C617 328 aa11.9□□□□□ -0.5
CGGBP1-201ENST00000309534 WDFY3Q8IZQ1 3526 aa11.9□□□□□ -0.5
CGGBP1-201ENST00000309534 F5H697 171 aa11.9□□□□□ -0.5
CGGBP1-201ENST00000309534 CCL24O00175 119 aa11.9□□□□□ -0.5
CGGBP1-201ENST00000309534 MGPP08493 103 aa11.9□□□□□ -0.51
CGGBP1-201ENST00000309534 CD33P20138 364 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 533 ms