RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 SERTAD4Q9NUC0 356 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 EPDR1Q9UM22 224 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 INSIG2Q9Y5U4 225 aa3.82□□□□□ -1.8
CKS1B-201ENST00000308987 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 IGKV1D-37A0A075B6S9 117 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 C19orf71A6NCJ1 209 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 C2orf70A6NJV1 201 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 ZNF785A8K8V0 405 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 TNFRSF13BO14836 293 aaPredicted RBP3.81□□□□□ -1.8
CKS1B-201ENST00000308987 SPRY3O43610 288 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 IGLV2-23P01705 113 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 IGKV1-16P04430 117 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 FRMD6-AS1P0C7T7 363 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 G0S2P27469 103 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 TSPOP30536 169 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 MFAP2P55001 183 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 FOXA3P55318 350 aaPredicted RBP3.81□□□□□ -1.8
CKS1B-201ENST00000308987 TCL1AP56279 114 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 UBE2G1P62253 170 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 HBBP68871 147 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 HOXA4Q00056 320 aaPredicted RBP3.81□□□□□ -1.8
CKS1B-201ENST00000308987 SLAQ13239 276 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 FXYD3Q14802 87 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 MRPL54Q6P161 138 aaKnown RBP3.81□□□□□ -1.8
CKS1B-201ENST00000308987 PATE2Q6UY27 113 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 Q6ZN92 141 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 C9orf139Q6ZV77 190 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 GATD1Q8NB37 220 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 TMEM116Q8NCL8 245 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 NUP35Q8NFH5 326 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 LEAP2Q969E1 77 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 ST6GALNAC6Q969X2 333 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 FXYD5Q96DB9 178 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 RCHY1Q96PM5 261 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 CCL13Q99616 98 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 RNF5Q99942 180 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 NDFIP1Q9BT67 221 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 FAM103A1Q9BTL3 118 aaKnown RBP3.81□□□□□ -1.8
CKS1B-201ENST00000308987 TMEM70Q9BUB7 260 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 CLEC7AQ9BXN2 247 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 MRPL20Q9BYC9 149 aaKnown RBP3.81□□□□□ -1.8
CKS1B-201ENST00000308987 RPP21Q9H633 154 aaKnown RBP3.81□□□□□ -1.8
CKS1B-201ENST00000308987 TNFRSF19Q9NS68 423 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 TMEM14CQ9P0S9 112 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 KAAG1Q9UBP8 84 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 WASHC3Q9Y3C0 194 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 STAB2Q8WWQ8 2551 aa3.81□□□□□ -1.8
CKS1B-201ENST00000308987 STARD9Q9P2P6 4700 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 HIGD1CA8MV81 97 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 M0R2Z0 102 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 FCN3O75636 299 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 LTAP01374 205 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 IGHV3-7P01780 117 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 HLA-DRB1P01911 266 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 RBP4P02753 201 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 SLC25A5P05141 298 aaKnown RBP3.8□□□□□ -1.8
CKS1B-201ENST00000308987 NPSP0C0P6 89 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 NBEAP1P0C6P0 100 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 MYOD1P15172 320 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 GATA2P23769 480 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-201ENST00000308987 GNG10P50151 68 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 WT1-ASQ06250 92 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 TNXAQ16473 311 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 DEFB112Q30KQ8 113 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 KIAA1644Q3SXP7 199 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 FAM201AQ5SY85 155 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 UTF1Q5T230 341 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 Q6AWC8 147 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 C16orf54Q6UWD8 224 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 PET117Q6UWS5 81 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 BRD3OSQ6XYD6 125 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 RBPMS2Q6ZRY4 209 aaKnown RBP3.8□□□□□ -1.8
CKS1B-201ENST00000308987 LINC00305Q7Z4B0 112 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 S100A7AQ86SG5 101 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 MOB3BQ86TA1 216 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 LYPD1Q8N2G4 141 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 C11orf42Q8N5U0 333 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 TEX29Q8N6K0 151 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 ARL6IP6Q8N6S5 226 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 FAM216BQ8N7L0 139 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 ZNF738Q8NE65 137 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 OR10W1Q8NGF6 305 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 OR2T6Q8NHC8 308 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 NPIPB3Q92617 1050 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 PMCHL2Q9BQD1 86 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 MS4A6AQ9H2W1 248 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 FNDC4Q9H6D8 234 aaPredicted RBP3.8□□□□□ -1.8
CKS1B-201ENST00000308987 OTORQ9NRC9 128 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 TNCP24821 2201 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 BIRC6Q9NR09 4857 aa3.8□□□□□ -1.8
CKS1B-201ENST00000308987 TRAV5A0A0B4J249 113 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 TRAV40A0A0B4J280 105 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 IGLC7A0M8Q6 106 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 PGPA6NDG6 321 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 FBLL1A6NHQ2 334 aaKnown RBP3.79□□□□□ -1.8
CKS1B-201ENST00000308987 TMEM178BH3BS89 294 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 K7EP13 123 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 NDUFB3O43676 98 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 NDUFB8O95169 186 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 P01737 135 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 269.2 ms