RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 PATE2Q6UY27 113 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 ARL17AQ8IVW1 177 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 C17orf77Q96MU5 243 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 INS-IGF2F8WCM5 200 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 DPM2O94777 84 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 TMEM213A2RRL7 107 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 A8MWP6 167 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 SMKR1H3BMG3 65 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 NSUN5P1Q3KNT7 163 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 MORN5Q5VZ52 161 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGHV4-30-2A0A087WSY4 118 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGKV3OR2-268A0A0C4DH90 116 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 LAGE3Q14657 143 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 ASPHD1Q5U4P2 390 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 C14orf178Q8N769 122 aaPredicted RBP9□□□□□ -0.97
PCDHGC3-201ENST00000308177 SPTBN4Q9H254 2564 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 ZFP36P26651 326 aaKnown RBP9□□□□□ -0.97
PCDHGC3-201ENST00000308177 FXYD7P58549 80 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 SLAQ13239 276 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 HTTP42858 3142 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 H7C2G1 150 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 EMP1P54849 157 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 COTL1Q14019 142 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 ZNF295-AS1Q8N0V1 137 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 ZC2HC1AQ96GY0 325 aa9□□□□□ -0.97
PCDHGC3-201ENST00000308177 TNRC6AQ8NDV7 1962 aaKnown RBP9□□□□□ -0.97
PCDHGC3-201ENST00000308177 SAP30O75446 220 aa8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 SONP18583 2426 aaKnown RBP8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGLV11-55A0A075B6I3 123 aa8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 IFI27P40305 119 aaPredicted RBP8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 PRB1P04280 392 aa8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 ZNF664Q8N3J9 261 aa8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 PRSS46E5RG02 174 aa8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 CIRBPQ14011 172 aaKnown RBP8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 VCX2Q9H322 139 aa8.99□□□□□ -0.97
PCDHGC3-201ENST00000308177 TEX22C9J3V5 150 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 K7ERU9 68 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 LTAP01374 205 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 SMIM13P0DJ93 91 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 C10orf105Q8TEF2 133 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 FAM104BQ5XKR9 115 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 Q8N9W7 124 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 FAM167A-AS1Q96KT0 104 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 VGLL1Q99990 258 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 MRPL36Q9P0J6 103 aaKnown RBP8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 GP9P14770 177 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 EIF4EBP1Q13541 118 aaPredicted RBP8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 PYGO2Q9BRQ0 406 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 C2orf88Q9BSF0 95 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 MYO9AB2RTY4 2548 aa8.98□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGKCP01834 107 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGHV4-38-2P0DP08 117 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 DEFB112Q30KQ8 113 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 C1orf229Q6ZS94 237 aaPredicted RBP8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 MS4A6AQ9H2W1 248 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 DEFB131AP59861 70 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 PLP1P60201 277 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 RCHY1Q96PM5 261 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 ALKBH7Q9BT30 221 aaPredicted RBP8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 CHD7Q9P2D1 2997 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGHV4-59P01825 116 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 CMC4P56277 68 aaPredicted RBP8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 TMEM101Q96IK0 257 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 KLF2Q9Y5W3 355 aaPredicted RBP8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 H3BUA1 57 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 COX6CP09669 75 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 SMPXQ9UHP9 88 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 MYO18BQ8IUG5 2567 aa8.97□□□□□ -0.97
PCDHGC3-201ENST00000308177 LINC01549A6NIU2 74 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 MEIG1Q5JSS6 88 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 OR2K2Q8NGT1 345 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 TMEM262E9PQX1 116 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 J3QKU1 62 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 CTSGP08311 255 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 HLA-DMBP28068 263 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 CHTOPQ9Y3Y2 248 aaKnown RBP8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 NAV3Q8IVL0 2385 aa8.96□□□□□ -0.97
PCDHGC3-201ENST00000308177 DSCAMO60469 2012 aa8.96□□□□□ -0.98
PCDHGC3-201ENST00000308177 WNK1Q9H4A3 2382 aa8.96□□□□□ -0.98
PCDHGC3-201ENST00000308177 TNFRSF6BO95407 300 aa8.96□□□□□ -0.98
PCDHGC3-201ENST00000308177 TMEM158Q8WZ71 300 aa8.96□□□□□ -0.98
PCDHGC3-201ENST00000308177 hDV102S1A0JD36 115 aa8.96□□□□□ -0.98
PCDHGC3-201ENST00000308177 HIVEP2P31629 2446 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 IGHV7-4-1A0A0J9YVY3 117 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 CRYGCP07315 174 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 ELANEP08246 267 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 MRPL52Q86TS9 123 aaKnown RBP8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 CRXO43186 299 aaPredicted RBP8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 BLCAPP62952 87 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 ZNF876PQ49A33 203 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 NRGNQ92686 78 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 MCRIP2Q9BUT9 160 aaKnown RBP8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 SIRPDQ9H106 197 aa8.95□□□□□ -0.98
PCDHGC3-201ENST00000308177 VCYO14598 125 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms