RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TRAV34A0A0B4J273 112 aa19.95■□□□□ 0.78
HDAC3-201ENST00000305264 SERTM2A0A1B0GWG4 89 aa19.95■□□□□ 0.78
HDAC3-201ENST00000305264 A8MZ25 164 aa19.95■□□□□ 0.78
HDAC3-201ENST00000305264 PDE6DO43924 150 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 IGLV2-11P01706 119 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 CT45A10P0DMU9 189 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 SRSF3P84103 164 aaKnown RBP19.94■□□□□ 0.78
HDAC3-201ENST00000305264 TMEM78Q5T7P6 136 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 C2CD4CQ8TF44 421 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 C11orf52Q96A22 123 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 F6UZH7 168 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 K7EQM0 130 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 SLC35B3Q9H1N7 401 aa19.94■□□□□ 0.78
HDAC3-201ENST00000305264 LOC102724200A0A096LPH7 203 aaPredicted RBP19.93■□□□□ 0.78
HDAC3-201ENST00000305264 FRMD6-AS1P0C7T7 363 aa19.93■□□□□ 0.78
HDAC3-201ENST00000305264 TMEM75Q8N9X5 138 aa19.93■□□□□ 0.78
HDAC3-201ENST00000305264 CLUHP3Q96NS8 147 aa19.93■□□□□ 0.78
HDAC3-201ENST00000305264 AKR1C3P42330 323 aa19.92■□□□□ 0.78
HDAC3-201ENST00000305264 LINC00322Q6ZN03 302 aaPredicted RBP19.92■□□□□ 0.78
HDAC3-201ENST00000305264 LINC00477Q96M19 166 aa19.92■□□□□ 0.78
HDAC3-201ENST00000305264 DERL1Q9BUN8 251 aa19.92■□□□□ 0.78
HDAC3-201ENST00000305264 FXYD7P58549 80 aa19.92■□□□□ 0.78
HDAC3-201ENST00000305264 DEFA6Q01524 100 aa19.92■□□□□ 0.78
HDAC3-201ENST00000305264 ZNF492Q9P255 531 aa19.92■□□□□ 0.78
HDAC3-201ENST00000305264 ZNF138P52744 262 aa19.91■□□□□ 0.78
HDAC3-201ENST00000305264 DEFB121Q5J5C9 76 aa19.91■□□□□ 0.78
HDAC3-201ENST00000305264 M0R2Z0 102 aa19.9■□□□□ 0.78
HDAC3-201ENST00000305264 FLI1Q01543 452 aaPredicted RBP19.9■□□□□ 0.78
HDAC3-201ENST00000305264 SPINK13Q1W4C9 94 aa19.9■□□□□ 0.78
HDAC3-201ENST00000305264 MRAPQ8TCY5 172 aa19.9■□□□□ 0.78
HDAC3-201ENST00000305264 PPP1R14DQ9NXH3 145 aa19.9■□□□□ 0.78
HDAC3-201ENST00000305264 PSG8Q9UQ74 426 aa19.9■□□□□ 0.78
HDAC3-201ENST00000305264 KLF12Q9Y4X4 402 aa19.9■□□□□ 0.78
HDAC3-201ENST00000305264 C9JQL5 133 aa19.89■□□□□ 0.77
HDAC3-201ENST00000305264 PRNTQ86SH4 94 aa19.89■□□□□ 0.77
HDAC3-201ENST00000305264 FAM19A4Q96LR4 140 aa19.89■□□□□ 0.77
HDAC3-201ENST00000305264 MED9Q9NWA0 146 aa19.89■□□□□ 0.77
HDAC3-201ENST00000305264 GIG44P09565 113 aaPredicted RBP19.88■□□□□ 0.77
HDAC3-201ENST00000305264 Q86TA4 180 aa19.88■□□□□ 0.77
HDAC3-201ENST00000305264 TVP23CQ96ET8 276 aa19.88■□□□□ 0.77
HDAC3-201ENST00000305264 UBE2G1P62253 170 aa19.88■□□□□ 0.77
HDAC3-201ENST00000305264 TMEM183BQ1AE95 376 aa19.88■□□□□ 0.77
HDAC3-201ENST00000305264 FMC1Q96HJ9 113 aa19.88■□□□□ 0.77
HDAC3-201ENST00000305264 ODF3Q96PU9 254 aa19.88■□□□□ 0.77
HDAC3-201ENST00000305264 TMEM250H0YL14 139 aa19.87■□□□□ 0.77
HDAC3-201ENST00000305264 SRP19P09132 144 aaKnown RBP19.87■□□□□ 0.77
HDAC3-201ENST00000305264 RPL35P42766 123 aaKnown RBP19.87■□□□□ 0.77
HDAC3-201ENST00000305264 KIR3DS1Q14943 382 aa19.87■□□□□ 0.77
HDAC3-201ENST00000305264 J3KRW8 73 aa19.86■□□□□ 0.77
HDAC3-201ENST00000305264 CA1P00915 261 aaPredicted RBP19.86■□□□□ 0.77
HDAC3-201ENST00000305264 NUTF2P61970 127 aaKnown RBP19.86■□□□□ 0.77
HDAC3-201ENST00000305264 PEA15Q15121 130 aa19.86■□□□□ 0.77
HDAC3-201ENST00000305264 CSTL1Q9H114 145 aa19.86■□□□□ 0.77
HDAC3-201ENST00000305264 RAB19A4D1S5 217 aa19.86■□□□□ 0.77
HDAC3-201ENST00000305264 CEBPGP53567 150 aa19.86■□□□□ 0.77
HDAC3-201ENST00000305264 MORN3Q6PF18 240 aaPredicted RBP19.86■□□□□ 0.77
HDAC3-201ENST00000305264 XCL2Q9UBD3 114 aa19.86■□□□□ 0.77
HDAC3-201ENST00000305264 TRAV12-2A0A075B6T6 113 aa19.85■□□□□ 0.77
HDAC3-201ENST00000305264 KIR2DL5BA0A0G2JN68 375 aa19.85■□□□□ 0.77
HDAC3-201ENST00000305264 KIR2DL5BA0A0G2JPC4 375 aa19.85■□□□□ 0.77
HDAC3-201ENST00000305264 APOC4P55056 127 aa19.85■□□□□ 0.77
HDAC3-201ENST00000305264 KIR2DL5AQ8N109 375 aa19.85■□□□□ 0.77
HDAC3-201ENST00000305264 KIR2DL5BQ8NHK3 375 aa19.85■□□□□ 0.77
HDAC3-201ENST00000305264 LINC00862A6NCI5 91 aa19.84■□□□□ 0.77
HDAC3-201ENST00000305264 FBLL1A6NHQ2 334 aaKnown RBP19.84■□□□□ 0.77
HDAC3-201ENST00000305264 CDKN1BP46527 198 aa19.84■□□□□ 0.77
HDAC3-201ENST00000305264 ZFAND2AQ8N6M9 145 aa19.84■□□□□ 0.77
HDAC3-201ENST00000305264 NBEAL2Q6ZNJ1 2754 aa19.84■□□□□ 0.77
HDAC3-201ENST00000305264 PRKDCP78527 4128 aaKnown RBP19.84■□□□□ 0.77
HDAC3-201ENST00000305264 CRISP2P16562 243 aa19.84■□□□□ 0.77
HDAC3-201ENST00000305264 LEPP41159 167 aa19.84■□□□□ 0.77
HDAC3-201ENST00000305264 PRR9Q5T870 116 aa19.84■□□□□ 0.77
HDAC3-201ENST00000305264 COMMD7Q86VX2 200 aa19.84■□□□□ 0.77
HDAC3-201ENST00000305264 CRXO43186 299 aaPredicted RBP19.83■□□□□ 0.77
HDAC3-201ENST00000305264 NDUFS6O75380 124 aaKnown RBP19.83■□□□□ 0.77
HDAC3-201ENST00000305264 C8orf49Q96NF6 230 aa19.83■□□□□ 0.77
HDAC3-201ENST00000305264 PARLQ9H300 379 aa19.83■□□□□ 0.77
HDAC3-201ENST00000305264 LENEPQ9Y5L5 61 aa19.83■□□□□ 0.77
HDAC3-201ENST00000305264 TRBV6-1A0A0K0K1D8 114 aa19.83■□□□□ 0.76
HDAC3-201ENST00000305264 LTAP01374 205 aa19.83■□□□□ 0.76
HDAC3-201ENST00000305264 SMDT1Q9H4I9 107 aa19.83■□□□□ 0.76
HDAC3-201ENST00000305264 TREM1Q9NP99 234 aa19.83■□□□□ 0.76
HDAC3-201ENST00000305264 TRBV7-9A0A0J9YWB2 115 aa19.82■□□□□ 0.76
HDAC3-201ENST00000305264 TSPOP30536 169 aa19.82■□□□□ 0.76
HDAC3-201ENST00000305264 IGF2BP2-AS1Q96M15 143 aa19.82■□□□□ 0.76
HDAC3-201ENST00000305264 TRBV20OR9-2A0A075B6H5 130 aa19.81■□□□□ 0.76
HDAC3-201ENST00000305264 KLLNB2CW77 178 aa19.81■□□□□ 0.76
HDAC3-201ENST00000305264 S100A9P06702 114 aaKnown RBP19.81■□□□□ 0.76
HDAC3-201ENST00000305264 ZNF674Q2M3X9 581 aa19.81■□□□□ 0.76
HDAC3-201ENST00000305264 GFI1BQ5VTD9 330 aa19.81■□□□□ 0.76
HDAC3-201ENST00000305264 NDFIP1Q9BT67 221 aa19.81■□□□□ 0.76
HDAC3-201ENST00000305264 CENPWQ5EE01 88 aa19.81■□□□□ 0.76
HDAC3-201ENST00000305264 NHLRC2Q8NBF2 726 aa19.81■□□□□ 0.76
HDAC3-201ENST00000305264 FBN3Q75N90 2809 aa19.8■□□□□ 0.76
HDAC3-201ENST00000305264 TAS2R60P59551 318 aa19.8■□□□□ 0.76
HDAC3-201ENST00000305264 BTN1A1Q13410 526 aa19.8■□□□□ 0.76
HDAC3-201ENST00000305264 GPX1P07203 203 aa19.79■□□□□ 0.76
HDAC3-201ENST00000305264 SBSPONQ8IVN8 264 aa19.79■□□□□ 0.76
HDAC3-201ENST00000305264 DEFB135Q30KP9 77 aa19.79■□□□□ 0.76
HDAC3-201ENST00000305264 SAPCD1Q5SSQ6 148 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms