RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 RNF5Q99942 180 aa12.67□□□□□ -0.38
LONRF3-201ENST00000304778 SRSF8Q9BRL6 282 aaKnown RBP12.67□□□□□ -0.38
LONRF3-201ENST00000304778 HAX1O00165 279 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 TIMM23O14925 209 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 OR11H6Q8NGC7 330 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 OR9G4Q8NGQ1 327 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 PCP2Q8IVA1 136 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 A0A1W2PRD5 423 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 A0A1W2PRF3 423 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 A0A1W2PRM7 423 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 M0R1W7 72 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 CSN1S1P47710 185 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 LOXL1Q08397 574 aaPredicted RBP12.66□□□□□ -0.38
LONRF3-201ENST00000304778 OR4X2Q8NGF9 303 aa12.66□□□□□ -0.38
LONRF3-201ENST00000304778 TRBV19A0A075B6N1 114 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 TMEM75Q8N9X5 138 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 DPF1Q92782 380 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 SHANK2-AS3Q9BTD1 123 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 DPM3Q9P2X0 92 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 H3BRN7 92 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 K7EIM0 57 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 OVOL3O00110 214 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 SMIM13P0DJ93 91 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 NMUP48645 174 aa12.65□□□□□ -0.38
LONRF3-201ENST00000304778 PRTN3P24158 256 aa12.64□□□□□ -0.39
LONRF3-201ENST00000304778 PRSS3P2Q8NHM4 247 aa12.64□□□□□ -0.39
LONRF3-201ENST00000304778 LOC389332A0A1B0GUA5 103 aa12.64□□□□□ -0.39
LONRF3-201ENST00000304778 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.64□□□□□ -0.39
LONRF3-201ENST00000304778 ZFP36P26651 326 aaKnown RBP12.64□□□□□ -0.39
LONRF3-201ENST00000304778 WFDC2Q14508 124 aa12.64□□□□□ -0.39
LONRF3-201ENST00000304778 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
LONRF3-201ENST00000304778 VGLL1Q99990 258 aa12.64□□□□□ -0.39
LONRF3-201ENST00000304778 ZNF785A8K8V0 405 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 CNIH1O95406 144 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 SIGLEC15Q6ZMC9 328 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 K7ERJ3 54 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 PRB1P04280 392 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 GCSHP23434 173 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 CACNG7P62955 275 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 C17orf77Q96MU5 243 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 A0A1B0GUT8 65 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 ODF3BA8MYP8 253 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 K7EQM0 130 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 LYPD1Q8N2G4 141 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 CFHR4Q92496 578 aa12.63□□□□□ -0.39
LONRF3-201ENST00000304778 SPANXB1Q9NS25 103 aaPredicted RBP12.63□□□□□ -0.39
LONRF3-201ENST00000304778 J3QR89 54 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 SIVA1O15304 175 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 ARMS2P0C7Q2 107 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 SPATA25Q9BR10 227 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 MYO18BQ8IUG5 2567 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 ASH1LQ9NR48 2969 aaKnown RBP12.62□□□□□ -0.39
LONRF3-201ENST00000304778 FXYD2P54710 66 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 SH2D6Q7Z4S9 175 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 VMO1Q7Z5L0 202 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 ZNF491Q8N8L2 437 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 RNF125Q96EQ8 232 aa12.62□□□□□ -0.39
LONRF3-201ENST00000304778 ZNF48Q96MX3 618 aaPredicted RBP12.62□□□□□ -0.39
LONRF3-201ENST00000304778 EFNA4P52798 201 aa12.61□□□□□ -0.39
LONRF3-201ENST00000304778 SPAG8Q99932 426 aaPredicted RBP12.61□□□□□ -0.39
LONRF3-201ENST00000304778 FOXI2Q6ZQN5 318 aa12.61□□□□□ -0.39
LONRF3-201ENST00000304778 GATD1Q8NB37 220 aa12.61□□□□□ -0.39
LONRF3-201ENST00000304778 PSG8Q9UQ74 426 aa12.61□□□□□ -0.39
LONRF3-201ENST00000304778 A0A096LNJ9 63 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 MRPS12O15235 138 aaKnown RBP12.6□□□□□ -0.39
LONRF3-201ENST00000304778 NBR2O15453 112 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 IL4P05112 153 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 IFI27P40305 119 aaPredicted RBP12.6□□□□□ -0.39
LONRF3-201ENST00000304778 ETDBQ3ZM63 59 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 BCL6BQ8N143 479 aaPredicted RBP12.6□□□□□ -0.39
LONRF3-201ENST00000304778 RIGQ13278 110 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 GEMIN7Q9H840 131 aaKnown RBP12.6□□□□□ -0.39
LONRF3-201ENST00000304778 ATP5G2Q06055 141 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 C1orf122Q6ZSJ8 110 aa12.6□□□□□ -0.39
LONRF3-201ENST00000304778 TMSB15BA0A087X1C1 80 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 TCTEX1D4Q5JR98 221 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 DYNAPQ8N1N2 210 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 ZNF414Q96IQ9 312 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 ZNF462Q96JM2 2506 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 A0A1B0GW15 77 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 WI2-2373I1.2A0A1W2PRP0 233 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 TMEM8BA6NDV4 472 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 K7EMI3 77 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 HES1Q14469 280 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 ARPC1AQ92747 370 aa12.59□□□□□ -0.39
LONRF3-201ENST00000304778 Q6AWC8 147 aa12.58□□□□□ -0.4
LONRF3-201ENST00000304778 MRAP2Q96G30 205 aa12.58□□□□□ -0.4
LONRF3-201ENST00000304778 NDUFA3O95167 84 aa12.58□□□□□ -0.4
LONRF3-201ENST00000304778 CRIP1P50238 77 aa12.58□□□□□ -0.4
LONRF3-201ENST00000304778 MTURNQ8N3F0 131 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 NPBQ8NG41 125 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 BPESC1Q9GZL8 116 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 M0R3E3 92 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 PDE6HQ13956 83 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 TTTY13Q9BZ97 58 aa12.57□□□□□ -0.4
LONRF3-201ENST00000304778 SIRPDQ9H106 197 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 255 ms