RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 F8VRH5 84 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 TEX36Q5VZQ5 186 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 HTN3P15516 51 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 THADAQ6YHU6 1953 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 CACNA1EQ15878 2313 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 VGLL1Q99990 258 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 AZU1P20160 251 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 ASPHD1Q5U4P2 390 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 PRADC1Q9BSG0 188 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 H3BMG7 143 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 DTX2Q86UW9 622 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
COL3A1-201ENST00000304636 DAZ1Q9NQZ3 744 aaKnown RBP10.26□□□□□ -0.77
COL3A1-201ENST00000304636 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 DUX4L9Q6RFH8 374 aaPredicted RBP10.25□□□□□ -0.77
COL3A1-201ENST00000304636 Q6ZVH6 145 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 BOD1L2Q8IYS8 172 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 A0A1W2PRX2 142 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 TCF15Q12870 199 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 Q6ZS92 163 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 IGLV1-44P01699 117 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 GAGE2AQ6NT46 116 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 PRIMA1Q86XR5 153 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 DKK2Q9UBU2 259 aa10.25□□□□□ -0.77
COL3A1-201ENST00000304636 K7ERJ3 54 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 CMC4P56277 68 aaPredicted RBP10.24□□□□□ -0.77
COL3A1-201ENST00000304636 SMIM2Q9BVW6 85 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 PRO1854Q9UHT4 67 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 TDRG1Q3Y452 100 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 TRAV26-2A0A0B4J265 109 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 E7EQL1 145 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 DNAJC30Q96LL9 226 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 A0A087WX48 190 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 C12orf74Q32Q52 190 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 KRTAP27-1Q3LI81 207 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 TPSG1Q9NRR2 321 aa10.24□□□□□ -0.77
COL3A1-201ENST00000304636 LY6G6EA0A0G2JKS1 128 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 H3BUX3 64 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 LOXP28300 417 aaPredicted RBP10.23□□□□□ -0.77
COL3A1-201ENST00000304636 C1orf159Q96HA4 380 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 U3KQA8 63 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 INAFM2P0DMQ5 153 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 CITED1Q99966 193 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 ZDBF2Q9HCK1 2354 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 TRGV1A0A0A0MS02 117 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 I3L3M4 83 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 C9orf153Q5TBE3 101 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 JPT2Q9H910 190 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 ANAPC1Q9H1A4 1944 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 C8orf86Q6ZUL3 223 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 C20orf78Q9BR46 151 aa10.23□□□□□ -0.77
COL3A1-201ENST00000304636 ATP6V0E1O15342 81 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 FGF6P10767 208 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 DTX1Q86Y01 620 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 PI4KAP42356 2102 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 IFITM1P13164 125 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 CEACAM8P31997 349 aaPredicted RBP10.22□□□□□ -0.77
COL3A1-201ENST00000304636 SAA4P35542 130 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 FAM120AOSQ5T036 256 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 RNF138Q8WVD3 245 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
COL3A1-201ENST00000304636 IGLV3-9A0A075B6K5 115 aa10.21□□□□□ -0.77
COL3A1-201ENST00000304636 TRAV13-1A0A0B4J241 112 aa10.21□□□□□ -0.77
COL3A1-201ENST00000304636 OVOL3O00110 214 aa10.21□□□□□ -0.77
COL3A1-201ENST00000304636 DKK1O94907 266 aa10.21□□□□□ -0.77
COL3A1-201ENST00000304636 INSP01308 110 aa10.21□□□□□ -0.77
COL3A1-201ENST00000304636 HLA-DMBP28068 263 aa10.21□□□□□ -0.77
COL3A1-201ENST00000304636 SCRT2Q9NQ03 307 aa10.21□□□□□ -0.77
COL3A1-201ENST00000304636 FER1L5A0AVI2 2057 aa10.21□□□□□ -0.77
COL3A1-201ENST00000304636 DSCR9P59020 149 aa10.21□□□□□ -0.78
COL3A1-201ENST00000304636 BRD3OSQ6XYD6 125 aa10.21□□□□□ -0.78
COL3A1-201ENST00000304636 FGF23Q9GZV9 251 aaPredicted RBP10.21□□□□□ -0.78
COL3A1-201ENST00000304636 LINC01545Q5VT33 79 aa10.21□□□□□ -0.78
COL3A1-201ENST00000304636 C8orf31Q8N9H6 132 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 IGF2BP2-AS1Q96M15 143 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 LAMTOR3Q9UHA4 124 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 UBE2E1P51965 193 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 AMTNQ6UX39 209 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 ZNF491Q8N8L2 437 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 PCP2Q8IVA1 136 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 C11orf53Q8IXP5 236 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 PIP4P2Q8N4L2 257 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 C1QTNF4Q9BXJ3 329 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 RHODO00212 210 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
COL3A1-201ENST00000304636 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
COL3A1-201ENST00000304636 HEATR1Q9H583 2144 aaKnown RBP10.19□□□□□ -0.78
COL3A1-201ENST00000304636 K7EMI3 77 aa10.19□□□□□ -0.78
COL3A1-201ENST00000304636 DIAPH2-AS1Q14236 149 aa10.19□□□□□ -0.78
COL3A1-201ENST00000304636 CEP250Q9BV73 2442 aa10.19□□□□□ -0.78
COL3A1-201ENST00000304636 UTF1Q5T230 341 aa10.19□□□□□ -0.78
COL3A1-201ENST00000304636 J3QQQ9 107 aa10.18□□□□□ -0.78
COL3A1-201ENST00000304636 RNASE8Q8TDE3 154 aaKnown RBP10.18□□□□□ -0.78
COL3A1-201ENST00000304636 C11orf1Q9H5F2 150 aa10.18□□□□□ -0.78
COL3A1-201ENST00000304636 DIDO1Q9BTC0 2240 aaKnown RBP10.18□□□□□ -0.78
COL3A1-201ENST00000304636 B4DSR2 109 aa10.18□□□□□ -0.78
COL3A1-201ENST00000304636 LY6HO94772 140 aa10.18□□□□□ -0.78
COL3A1-201ENST00000304636 SHISA9B4DS77 424 aa10.18□□□□□ -0.78
COL3A1-201ENST00000304636 IGHV3-53P01767 116 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms