RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ATP5G3P48201 142 aa18.68■□□□□ 0.58
CDKN2A-201ENST00000304494 TMEM78Q5T7P6 136 aa18.68■□□□□ 0.58
CDKN2A-201ENST00000304494 LYPD1Q8N2G4 141 aa18.68■□□□□ 0.58
CDKN2A-201ENST00000304494 FAM19A4Q96LR4 140 aa18.68■□□□□ 0.58
CDKN2A-201ENST00000304494 WFDC1Q9HC57 220 aa18.68■□□□□ 0.58
CDKN2A-201ENST00000304494 C7orf71A4D174 169 aa18.67■□□□□ 0.58
CDKN2A-201ENST00000304494 UBE2L3P68036 154 aaKnown RBP18.67■□□□□ 0.58
CDKN2A-201ENST00000304494 C15orf53Q8NAA6 179 aa18.67■□□□□ 0.58
CDKN2A-201ENST00000304494 PHYHIPLQ96FC7 376 aa18.67■□□□□ 0.58
CDKN2A-201ENST00000304494 IGKV2-40A0A087WW87 121 aaPredicted RBP18.66■□□□□ 0.58
CDKN2A-201ENST00000304494 KLLNB2CW77 178 aa18.66■□□□□ 0.58
CDKN2A-201ENST00000304494 IGKV2D-40P01614 121 aaPredicted RBP18.66■□□□□ 0.58
CDKN2A-201ENST00000304494 CSN1S1P47710 185 aa18.66■□□□□ 0.58
CDKN2A-201ENST00000304494 ACOT6Q3I5F7 207 aaPredicted RBP18.66■□□□□ 0.58
CDKN2A-201ENST00000304494 UBE2DNLQ8IWF7 75 aa18.66■□□□□ 0.58
CDKN2A-201ENST00000304494 ASB13Q8WXK3 278 aa18.66■□□□□ 0.58
CDKN2A-201ENST00000304494 SNURFLB1AK76 121 aa18.65■□□□□ 0.58
CDKN2A-201ENST00000304494 F5H768 121 aa18.65■□□□□ 0.58
CDKN2A-201ENST00000304494 NMBP08949 121 aa18.65■□□□□ 0.58
CDKN2A-201ENST00000304494 CRISP2P16562 243 aa18.65■□□□□ 0.58
CDKN2A-201ENST00000304494 ZNF266Q14584 549 aa18.65■□□□□ 0.58
CDKN2A-201ENST00000304494 ZNF503Q96F45 646 aa18.65■□□□□ 0.58
CDKN2A-201ENST00000304494 DNAH10Q8IVF4 4471 aa18.64■□□□□ 0.58
CDKN2A-201ENST00000304494 M6PRP20645 277 aa18.64■□□□□ 0.57
CDKN2A-201ENST00000304494 RANP62826 216 aaKnown RBP18.64■□□□□ 0.57
CDKN2A-201ENST00000304494 A0A1W2PPV4 95 aa18.63■□□□□ 0.57
CDKN2A-201ENST00000304494 GPX1P07203 203 aa18.63■□□□□ 0.57
CDKN2A-201ENST00000304494 RNF212Q495C1 297 aa18.63■□□□□ 0.57
CDKN2A-201ENST00000304494 AQP10Q96PS8 301 aa18.63■□□□□ 0.57
CDKN2A-201ENST00000304494 VGLL1Q99990 258 aa18.63■□□□□ 0.57
CDKN2A-201ENST00000304494 Q9H3A6 140 aa18.63■□□□□ 0.57
CDKN2A-201ENST00000304494 GIPP09681 153 aaPredicted RBP18.62■□□□□ 0.57
CDKN2A-201ENST00000304494 RNASE4P34096 147 aaKnown RBP18.62■□□□□ 0.57
CDKN2A-201ENST00000304494 BTN1A1Q13410 526 aa18.62■□□□□ 0.57
CDKN2A-201ENST00000304494 LINC00467Q9BRT7 94 aa18.62■□□□□ 0.57
CDKN2A-201ENST00000304494 ZNF492Q9P255 531 aa18.62■□□□□ 0.57
CDKN2A-201ENST00000304494 RBAKDNA6NC62 111 aa18.61■□□□□ 0.57
CDKN2A-201ENST00000304494 ZNF324O75467 553 aaPredicted RBP18.61■□□□□ 0.57
CDKN2A-201ENST00000304494 ZNF138P52744 262 aa18.61■□□□□ 0.57
CDKN2A-201ENST00000304494 CD300CQ08708 224 aa18.61■□□□□ 0.57
CDKN2A-201ENST00000304494 ZNF680Q8NEM1 530 aa18.61■□□□□ 0.57
CDKN2A-201ENST00000304494 TRBV7-9A0A0J9YWB2 115 aa18.6■□□□□ 0.57
CDKN2A-201ENST00000304494 PQLC2Q6ZP29 291 aa18.6■□□□□ 0.57
CDKN2A-201ENST00000304494 LINC00612Q8N6U2 182 aa18.6■□□□□ 0.57
CDKN2A-201ENST00000304494 RXFP4Q8TDU9 374 aa18.6■□□□□ 0.57
CDKN2A-201ENST00000304494 DAZ2Q13117 558 aaKnown RBP18.59■□□□□ 0.57
CDKN2A-201ENST00000304494 EIF4E3Q8N5X7 224 aaKnown RBP18.59■□□□□ 0.57
CDKN2A-201ENST00000304494 ZFAND2AQ8N6M9 145 aa18.59■□□□□ 0.57
CDKN2A-201ENST00000304494 OR10G4Q8NGN3 311 aa18.59■□□□□ 0.57
CDKN2A-201ENST00000304494 OR10G9Q8NGN4 311 aa18.59■□□□□ 0.57
CDKN2A-201ENST00000304494 OR10G7Q8NGN6 311 aa18.59■□□□□ 0.57
CDKN2A-201ENST00000304494 RAB2AP61019 212 aa18.58■□□□□ 0.56
CDKN2A-201ENST00000304494 RGS21Q2M5E4 152 aa18.58■□□□□ 0.56
CDKN2A-201ENST00000304494 ANXA2RQ3ZCQ2 193 aa18.58■□□□□ 0.56
CDKN2A-201ENST00000304494 FAM74A1Q5RGS3 127 aa18.58■□□□□ 0.56
CDKN2A-201ENST00000304494 GAGE12BA1L429 117 aa18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 GAGE7O76087 117 aa18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 GAGE12FP0CL80 117 aa18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 GAGE12GP0CL81 117 aa18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 GAGE12IP0CL82 117 aa18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 HSD17B11Q8NBQ5 300 aa18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 INO80EQ8NBZ0 244 aaPredicted RBP18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 OR2G3Q8NGZ4 309 aa18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 OTORQ9NRC9 128 aa18.57■□□□□ 0.56
CDKN2A-201ENST00000304494 DIRC3C9JPN6 131 aa18.56■□□□□ 0.56
CDKN2A-201ENST00000304494 FAM3BP58499 235 aaPredicted RBP18.56■□□□□ 0.56
CDKN2A-201ENST00000304494 Q8TAT8 98 aa18.56■□□□□ 0.56
CDKN2A-201ENST00000304494 ATG101Q9BSB4 218 aa18.56■□□□□ 0.56
CDKN2A-201ENST00000304494 PSMG3Q9BT73 122 aaPredicted RBP18.56■□□□□ 0.56
CDKN2A-201ENST00000304494 RGS13O14921 159 aa18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 EIF3GO75821 320 aaKnown RBP eCLIP18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 NUDT3O95989 172 aa18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 LGALS9BQ3B8N2 356 aa18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 Q5BKY6 102 aa18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 C11orf72Q8NBR9 251 aa18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 CMTM2Q8TAZ6 248 aa18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 HYLS1Q96M11 299 aa18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 GSN-AS1Q9NRJ2 163 aa18.55■□□□□ 0.56
CDKN2A-201ENST00000304494 CDC34P49427 236 aaPredicted RBP18.54■□□□□ 0.56
CDKN2A-201ENST00000304494 PRR9Q5T870 116 aa18.54■□□□□ 0.56
CDKN2A-201ENST00000304494 LENEPQ9Y5L5 61 aa18.54■□□□□ 0.56
CDKN2A-201ENST00000304494 PGPA6NDG6 321 aa18.53■□□□□ 0.56
CDKN2A-201ENST00000304494 MBP02144 154 aa18.53■□□□□ 0.56
CDKN2A-201ENST00000304494 SERF2P84101 59 aa18.53■□□□□ 0.56
CDKN2A-201ENST00000304494 OR5I1Q13606 314 aa18.53■□□□□ 0.56
CDKN2A-201ENST00000304494 IBA57Q5T440 356 aaKnown RBP18.53■□□□□ 0.56
CDKN2A-201ENST00000304494 LINC00336Q6ZUF6 198 aa18.53■□□□□ 0.56
CDKN2A-201ENST00000304494 ARL6IP6Q8N6S5 226 aa18.53■□□□□ 0.56
CDKN2A-201ENST00000304494 IGHV1OR15-1A0A075B7D0 117 aa18.52■□□□□ 0.56
CDKN2A-201ENST00000304494 M0R2N4 97 aa18.52■□□□□ 0.56
CDKN2A-201ENST00000304494 ATP6V0CP27449 155 aa18.52■□□□□ 0.56
CDKN2A-201ENST00000304494 Q6ZTI0 123 aa18.52■□□□□ 0.56
CDKN2A-201ENST00000304494 TMED6Q8WW62 240 aa18.52■□□□□ 0.56
CDKN2A-201ENST00000304494 FXYD6-FXYD2A0A087WZ82 144 aa18.51■□□□□ 0.55
CDKN2A-201ENST00000304494 HMGB3O15347 200 aaKnown RBP18.51■□□□□ 0.55
CDKN2A-201ENST00000304494 OR2T35Q8NGX2 323 aa18.51■□□□□ 0.55
CDKN2A-201ENST00000304494 ARPC5LQ9BPX5 153 aa18.51■□□□□ 0.55
CDKN2A-201ENST00000304494 IGLV2-18A0A075B6J9 118 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 TRGV2A0A075B6R0 118 aa18.5■□□□□ 0.55
CDKN2A-201ENST00000304494 STAG3L2P0CL84 134 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms