RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 SIGMAR1Q99720 223 aa13.44□□□□□ -0.26
PDS5A-201ENST00000303538 RHODO00212 210 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 C17orf82Q86X59 251 aaPredicted RBP13.43□□□□□ -0.26
PDS5A-201ENST00000303538 LYPD1Q8N2G4 141 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 NDUFS7O75251 213 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 C8orf86Q6ZUL3 223 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 TRAV12-1A0A0B4J245 112 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 I3L3M4 83 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 OVOL2Q9BRP0 275 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 C9JAW5 83 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 CXCL1P09341 107 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 CDKN1BP46527 198 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 CHAC1Q9BUX1 264 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 RSPO3Q9BXY4 272 aaPredicted RBP13.43□□□□□ -0.26
PDS5A-201ENST00000303538 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 HLA-DRB4P13762 266 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 HLA-DRB4X5D2U9 266 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 SMIM2Q9BVW6 85 aa13.43□□□□□ -0.26
PDS5A-201ENST00000303538 J3QLI3 93 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 RPL18AQ02543 176 aaKnown RBP13.42□□□□□ -0.26
PDS5A-201ENST00000303538 LINC01551Q86U37 167 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 CCL24O00175 119 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 XCL1P47992 114 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 IGHV4-59P01825 116 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 HAMPP81172 84 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 TSSC4Q9Y5U2 329 aaPredicted RBP13.42□□□□□ -0.26
PDS5A-201ENST00000303538 DEFB113Q30KQ7 82 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 HS3ST6Q96QI5 342 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 PCNX2A6NKB5 2137 aa13.42□□□□□ -0.26
PDS5A-201ENST00000303538 IGHV4-4A0A075B6R2 117 aa13.41□□□□□ -0.26
PDS5A-201ENST00000303538 DEFB112Q30KQ8 113 aa13.41□□□□□ -0.26
PDS5A-201ENST00000303538 Q86TA4 180 aa13.41□□□□□ -0.26
PDS5A-201ENST00000303538 CREBBPQ92793 2442 aa13.41□□□□□ -0.26
PDS5A-201ENST00000303538 GRNP28799 593 aaKnown RBP13.41□□□□□ -0.26
PDS5A-201ENST00000303538 ZFAND6Q6FIF0 208 aa13.41□□□□□ -0.26
PDS5A-201ENST00000303538 CHD3Q12873 2000 aaKnown RBP13.41□□□□□ -0.26
PDS5A-201ENST00000303538 NMSQ5H8A3 153 aa13.4□□□□□ -0.26
PDS5A-201ENST00000303538 ESM1Q9NQ30 184 aa13.4□□□□□ -0.26
PDS5A-201ENST00000303538 A0A1B0GUS0 222 aa13.4□□□□□ -0.26
PDS5A-201ENST00000303538 TMEM14EPQ6UXP3 125 aa13.4□□□□□ -0.26
PDS5A-201ENST00000303538 A0A0G2JRQ6 117 aa13.4□□□□□ -0.26
PDS5A-201ENST00000303538 TEX48A0A1B0GUV7 120 aa13.4□□□□□ -0.26
PDS5A-201ENST00000303538 STPG4Q8N801 248 aa13.4□□□□□ -0.26
PDS5A-201ENST00000303538 J3QRE1 110 aa13.4□□□□□ -0.27
PDS5A-201ENST00000303538 LMO1P25800 156 aa13.4□□□□□ -0.27
PDS5A-201ENST00000303538 MGAMO43451 1857 aa13.39□□□□□ -0.27
PDS5A-201ENST00000303538 ZFP36P26651 326 aaKnown RBP13.39□□□□□ -0.27
PDS5A-201ENST00000303538 TIMM17AQ99595 171 aa13.39□□□□□ -0.27
PDS5A-201ENST00000303538 LINC01559Q495D7 138 aa13.39□□□□□ -0.27
PDS5A-201ENST00000303538 PIFOQ8TCI5 191 aa13.38□□□□□ -0.27
PDS5A-201ENST00000303538 HIST2H2BCQ6DN03 193 aa13.38□□□□□ -0.27
PDS5A-201ENST00000303538 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
PDS5A-201ENST00000303538 GPR179Q6PRD1 2367 aa13.38□□□□□ -0.27
PDS5A-201ENST00000303538 SOCS3O14543 225 aa13.38□□□□□ -0.27
PDS5A-201ENST00000303538 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
PDS5A-201ENST00000303538 PFN1P07737 140 aaKnown RBP13.38□□□□□ -0.27
PDS5A-201ENST00000303538 MORN5Q5VZ52 161 aa13.38□□□□□ -0.27
PDS5A-201ENST00000303538 APRG1Q8IVJ8 170 aa13.38□□□□□ -0.27
PDS5A-201ENST00000303538 CRLF1O75462 422 aa13.37□□□□□ -0.27
PDS5A-201ENST00000303538 HIST1H2BLQ99880 126 aa13.37□□□□□ -0.27
PDS5A-201ENST00000303538 TPSG1Q9NRR2 321 aa13.37□□□□□ -0.27
PDS5A-201ENST00000303538 SDHAF1A6NFY7 115 aa13.37□□□□□ -0.27
PDS5A-201ENST00000303538 CLPSL1A2RUU4 121 aa13.37□□□□□ -0.27
PDS5A-201ENST00000303538 NDUFA4O00483 81 aa13.37□□□□□ -0.27
PDS5A-201ENST00000303538 PLXND1Q9Y4D7 1925 aa13.36□□□□□ -0.27
PDS5A-201ENST00000303538 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
PDS5A-201ENST00000303538 LHFPL1Q86WI0 220 aa13.36□□□□□ -0.27
PDS5A-201ENST00000303538 DSCR8Q96T75 97 aa13.36□□□□□ -0.27
PDS5A-201ENST00000303538 SYS1-DBNDD2H3BUS1 97 aa13.36□□□□□ -0.27
PDS5A-201ENST00000303538 BUB3O43684 328 aa13.36□□□□□ -0.27
PDS5A-201ENST00000303538 SPINK8P0C7L1 97 aa13.36□□□□□ -0.27
PDS5A-201ENST00000303538 PDE6HQ13956 83 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 C2orf66Q6UXQ4 117 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 Q6ZRM9 215 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 FRMPD3Q5JV73 1810 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 K7EM74 188 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 IGHV3-30P01768 117 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 IGHV3-33P01772 117 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 IGHV3-30-3P0DP02 117 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 IGHV3-30-5P0DP03 117 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 MRPL27Q9P0M9 148 aaKnown RBP13.35□□□□□ -0.27
PDS5A-201ENST00000303538 COX11Q9Y6N1 276 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 IGLV3-9A0A075B6K5 115 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 DIAPH2-AS1Q14236 149 aa13.35□□□□□ -0.27
PDS5A-201ENST00000303538 NBL1P41271 181 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 KMT2EQ8IZD2 1858 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 CRYGCP07315 174 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 KIR3DS1Q14943 382 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 C1orf43Q9BWL3 253 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 IGLV10-54A0A075B6I4 117 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 F6UB75 175 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 CCL18P55774 89 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 HEATR5AQ86XA9 2040 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 SLURP1P55000 103 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 C9orf66Q5T8R8 295 aa13.34□□□□□ -0.27
PDS5A-201ENST00000303538 C3orf79P0CE67 100 aa13.33□□□□□ -0.27
PDS5A-201ENST00000303538 LOXP28300 417 aaPredicted RBP13.33□□□□□ -0.27
PDS5A-201ENST00000303538 VPREB3Q9UKI3 123 aa13.33□□□□□ -0.27
PDS5A-201ENST00000303538 GP9P14770 177 aa13.33□□□□□ -0.28
PDS5A-201ENST00000303538 TMEM75Q8N9X5 138 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms