RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 C10orf91Q5T1B1 145 aa11.15□□□□□ -0.62
PRKCB-201ENST00000303531 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
PRKCB-201ENST00000303531 NDUFS8O00217 210 aa11.15□□□□□ -0.62
PRKCB-201ENST00000303531 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.62
PRKCB-201ENST00000303531 ADAMTSL5Q6ZMM2 481 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 Q8N8P6 123 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 KLK9Q9UKQ9 250 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 K7ENP7 123 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 IGHV1-69DA0A0B4J2H0 117 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 MMP23AO75900 390 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 IGHV1-69P01742 117 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 SMIM27A0A1W2PRY6 76 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 MRPL51Q4U2R6 128 aaKnown RBP11.14□□□□□ -0.63
PRKCB-201ENST00000303531 TEX36Q5VZQ5 186 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 C8orf86Q6ZUL3 223 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 SSBP2P81877 361 aaPredicted RBP11.14□□□□□ -0.63
PRKCB-201ENST00000303531 Q6ZWC4 215 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
PRKCB-201ENST00000303531 WIPF3A6NGB9 483 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 C9JAW5 83 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 H3BRN7 92 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 XCL2Q9UBD3 114 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 PLXNA2O75051 1894 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 TRAV26-2A0A0B4J265 109 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 LINC00311Q8N616 119 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 PRR25Q96S07 402 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 IGLV3-9A0A075B6K5 115 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 IGLV1-44P01699 117 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 UBE2DNLQ8IWF7 75 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 ZNF625Q96I27 306 aaPredicted RBP11.13□□□□□ -0.63
PRKCB-201ENST00000303531 MGAMO43451 1857 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 CEACAM8P31997 349 aaPredicted RBP11.13□□□□□ -0.63
PRKCB-201ENST00000303531 DIAPH2-AS1Q14236 149 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 SS18Q15532 418 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 IGFL3Q6UXB1 125 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 GTF3C1Q12789 2109 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 IGHV1-24A0A0C4DH33 117 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 PRSS57Q6UWY2 283 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 SNHG12Q9BXW3 62 aa11.13□□□□□ -0.63
PRKCB-201ENST00000303531 ASPHD1Q5U4P2 390 aa11.12□□□□□ -0.63
PRKCB-201ENST00000303531 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
PRKCB-201ENST00000303531 TMEM14CQ9P0S9 112 aa11.12□□□□□ -0.63
PRKCB-201ENST00000303531 PLXND1Q9Y4D7 1925 aa11.12□□□□□ -0.63
PRKCB-201ENST00000303531 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
PRKCB-201ENST00000303531 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
PRKCB-201ENST00000303531 GATA3P23771 443 aa11.11□□□□□ -0.63
PRKCB-201ENST00000303531 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
PRKCB-201ENST00000303531 NACAE9PAV3 2078 aa11.11□□□□□ -0.63
PRKCB-201ENST00000303531 IGLC2P0DOY2 106 aa11.11□□□□□ -0.63
PRKCB-201ENST00000303531 IGLC3P0DOY3 106 aa11.11□□□□□ -0.63
PRKCB-201ENST00000303531 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 GAGE12JA6NER3 117 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 I3L3M4 83 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 RHODO00212 210 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 GAGE1Q13065 139 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 GAGE4Q13068 117 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 GAGE5Q13069 117 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 IGHV2-5P01817 119 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 CFHR3Q02985 330 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 PMVKQ15126 192 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 FXYD5Q96DB9 178 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 LINC01619G3V211 115 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 GAGE2AQ6NT46 116 aa11.1□□□□□ -0.63
PRKCB-201ENST00000303531 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 TRAV12-2A0A075B6T6 113 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 IGHV1OR15-1A0A075B7D0 117 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 RNF114Q9Y508 228 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 KMT2EQ8IZD2 1858 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 NDUFA4O00483 81 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 SIGLEC8Q9NYZ4 499 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 IGLC1P0CG04 106 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 DEFB121Q5J5C9 76 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 THAP8Q8NA92 274 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 ZNF48Q96MX3 618 aaPredicted RBP11.09□□□□□ -0.63
PRKCB-201ENST00000303531 FAM215AQ9Y5M1 114 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 MED13LQ71F56 2210 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
PRKCB-201ENST00000303531 SP5Q6BEB4 398 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-201ENST00000303531 IGHV2-70P01814 119 aa11.08□□□□□ -0.64
PRKCB-201ENST00000303531 SPINK8P0C7L1 97 aa11.08□□□□□ -0.64
PRKCB-201ENST00000303531 IGLL1P15814 213 aa11.08□□□□□ -0.64
PRKCB-201ENST00000303531 IL15RAQ13261 267 aa11.08□□□□□ -0.64
PRKCB-201ENST00000303531 NPYP01303 97 aa11.07□□□□□ -0.64
PRKCB-201ENST00000303531 ANAPC1Q9H1A4 1944 aa11.07□□□□□ -0.64
PRKCB-201ENST00000303531 DNAJC30Q96LL9 226 aa11.07□□□□□ -0.64
PRKCB-201ENST00000303531 CDKN1BP46527 198 aa11.07□□□□□ -0.64
PRKCB-201ENST00000303531 LGALS9BQ3B8N2 356 aa11.07□□□□□ -0.64
PRKCB-201ENST00000303531 LGALS9CQ6DKI2 356 aa11.07□□□□□ -0.64
PRKCB-201ENST00000303531 AZU1P20160 251 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 PRR20EP86478 221 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 PRR20CP86479 221 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 PRR20DP86480 221 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 PRR20BP86481 221 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 PRR20AP86496 221 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms