RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 PRSS46E5RG02 174 aa11.17□□□□□ -0.62
SDC2-201ENST00000302190 C1orf159Q96HA4 380 aa11.17□□□□□ -0.62
SDC2-201ENST00000302190 A1L4Q6 167 aa11.17□□□□□ -0.62
SDC2-201ENST00000302190 POU2AF1Q16633 256 aa11.17□□□□□ -0.62
SDC2-201ENST00000302190 C15orf32Q32M92 178 aa11.17□□□□□ -0.62
SDC2-201ENST00000302190 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
SDC2-201ENST00000302190 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
SDC2-201ENST00000302190 MRPL27Q9P0M9 148 aaKnown RBP11.17□□□□□ -0.62
SDC2-201ENST00000302190 FAM169BQ8N8A8 192 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 Q8N976 141 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 NUP37Q8NFH4 326 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 LEPP41159 167 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 DLX6P56179 175 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 TMEM249Q2WGJ8 235 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 GDF5OSQ5U4N7 250 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 METTL26Q96S19 204 aa11.16□□□□□ -0.62
SDC2-201ENST00000302190 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.62
SDC2-201ENST00000302190 CGB3P0DN86 165 aa11.15□□□□□ -0.62
SDC2-201ENST00000302190 CGB7P0DN87 165 aa11.15□□□□□ -0.62
SDC2-201ENST00000302190 HIST1H1AQ02539 215 aaPredicted RBP11.15□□□□□ -0.62
SDC2-201ENST00000302190 SRSF9Q13242 221 aaKnown RBP eCLIP11.15□□□□□ -0.62
SDC2-201ENST00000302190 GTSF1Q8WW33 167 aa11.15□□□□□ -0.62
SDC2-201ENST00000302190 CD5LO43866 347 aa11.15□□□□□ -0.63
SDC2-201ENST00000302190 SH2D1AO60880 128 aa11.15□□□□□ -0.63
SDC2-201ENST00000302190 NDUFA3O95167 84 aa11.15□□□□□ -0.63
SDC2-201ENST00000302190 THBDP07204 575 aa11.15□□□□□ -0.63
SDC2-201ENST00000302190 BVES-AS1Q5T3Y7 98 aa11.15□□□□□ -0.63
SDC2-201ENST00000302190 SIGMAR1Q99720 223 aa11.15□□□□□ -0.63
SDC2-201ENST00000302190 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.63
SDC2-201ENST00000302190 HRNRQ86YZ3 2850 aaPredicted RBP11.14□□□□□ -0.63
SDC2-201ENST00000302190 IGLV2-8P01709 118 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 AZU1P20160 251 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 C5orf64Q2M2E5 130 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 IFI27L1Q96BM0 104 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 BRD3OSQ6XYD6 125 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 SPCS1Q9Y6A9 102 aa11.14□□□□□ -0.63
SDC2-201ENST00000302190 CELSR1Q9NYQ6 3014 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 FAM231BA6NCW3 169 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 G3V318 75 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 FABP2P12104 132 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 TRGV3P03979 118 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 PSG3Q16557 428 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 SOX21Q9Y651 276 aaPredicted RBP11.13□□□□□ -0.63
SDC2-201ENST00000302190 G3V4G9 280 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 H7C2G1 150 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 PVRIGQ6DKI7 326 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
SDC2-201ENST00000302190 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
SDC2-201ENST00000302190 CELSR2Q9HCU4 2923 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 FAM120AOSQ5T036 256 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 HIST1H4GQ99525 98 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 TRBV19A0A075B6N1 114 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 FABP5P3A8MUU1 101 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 HBDP02042 147 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 LCNL1Q6ZST4 164 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 VMO1Q7Z5L0 202 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 ATP6V0BQ99437 205 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 NHP2Q9NX24 153 aaKnown RBP11.12□□□□□ -0.63
SDC2-201ENST00000302190 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 TGFAP01135 160 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 SCGB1C2P0DMR2 95 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 RAB9AP51151 201 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 CKS1BP61024 79 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 IGFL3Q6UXB1 125 aa11.12□□□□□ -0.63
SDC2-201ENST00000302190 IGKV1D-37A0A075B6S9 117 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 LOC107984156A0A0G2JMH3 177 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 H3BVH4 76 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 PRB1P04280 392 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 ARL17AQ8IVW1 177 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 SHANK2-AS3Q9BTD1 123 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 FAM231DQ6ZW35 169 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 VGLL1Q99990 258 aa11.11□□□□□ -0.63
SDC2-201ENST00000302190 RASL11AQ6T310 242 aa11.1□□□□□ -0.63
SDC2-201ENST00000302190 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
SDC2-201ENST00000302190 K7EMI3 77 aa11.1□□□□□ -0.63
SDC2-201ENST00000302190 BCL6BQ8N143 479 aaPredicted RBP11.1□□□□□ -0.63
SDC2-201ENST00000302190 VKORC1Q9BQB6 163 aa11.1□□□□□ -0.63
SDC2-201ENST00000302190 ABCA12Q86UK0 2595 aa11.1□□□□□ -0.63
SDC2-201ENST00000302190 TRAV26-1A0A087WT03 109 aa11.1□□□□□ -0.63
SDC2-201ENST00000302190 MTURNQ8N3F0 131 aa11.1□□□□□ -0.63
SDC2-201ENST00000302190 TRAV26-2A0A0B4J265 109 aa11.09□□□□□ -0.63
SDC2-201ENST00000302190 Q71RC1 249 aaPredicted RBP11.09□□□□□ -0.63
SDC2-201ENST00000302190 ZNF491Q8N8L2 437 aa11.09□□□□□ -0.63
SDC2-201ENST00000302190 GATA1P15976 413 aaPredicted RBP11.09□□□□□ -0.63
SDC2-201ENST00000302190 Q1RN00 199 aa11.09□□□□□ -0.63
SDC2-201ENST00000302190 OR10J6PQ8NGY7 276 aa11.09□□□□□ -0.63
SDC2-201ENST00000302190 TTTY13Q9BZ97 58 aa11.09□□□□□ -0.63
SDC2-201ENST00000302190 MTORP42345 2549 aa11.09□□□□□ -0.63
SDC2-201ENST00000302190 SHISA9B4DS77 424 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms