RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 UCNP55089 124 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 DTX2Q86UW9 622 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 COL25A1Q9BXS0 654 aaPredicted RBP10.03□□□□□ -0.8
HIF3A-204ENST00000300862 SIRPDQ9H106 197 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 TMEM189A5PLL7 270 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 ZNF80P51504 273 aaPredicted RBP10.03□□□□□ -0.8
HIF3A-204ENST00000300862 PDE6HQ13956 83 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 C15orf32Q32M92 178 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 LINC01545Q5VT33 79 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 PRSS57Q6UWY2 283 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 AMN1Q8IY45 258 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 CSTL1Q9H114 145 aa10.03□□□□□ -0.8
HIF3A-204ENST00000300862 G3V318 75 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 IGHG4P01861 327 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 OR5AL1P0C617 328 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 RPL7P18124 248 aaKnown RBP10.02□□□□□ -0.81
HIF3A-204ENST00000300862 FXYD7P58549 80 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 MS4A6AQ9H2W1 248 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 RABAC1Q9UI14 185 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 IGHV3-49A0A0A0MS15 119 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 GAGE12BA1L429 117 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 ATP6V0E1O15342 81 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 CLEC3BP05452 202 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 SAA4P35542 130 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 LOXL1Q08397 574 aaPredicted RBP10.02□□□□□ -0.81
HIF3A-204ENST00000300862 EBI3Q14213 229 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 MINOS1Q5TGZ0 78 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 AJUBAQ96IF1 538 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 ZNF48Q96MX3 618 aaPredicted RBP10.02□□□□□ -0.81
HIF3A-204ENST00000300862 MINOS1-NBL1R4GNA1 71 aa10.02□□□□□ -0.81
HIF3A-204ENST00000300862 D6R8Y8 96 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
HIF3A-204ENST00000300862 ERCC8Q13216 396 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 PRR25Q96S07 402 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 BPESC1Q9GZL8 116 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 SNAI2O43623 268 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 NCR2O95944 276 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 COX8AP10176 69 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 S100A7AQ86SG5 101 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 RNF182Q8N6D2 247 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 HSPB8Q9UJY1 196 aa10.01□□□□□ -0.81
HIF3A-204ENST00000300862 IGHV3OR16-10A0A075B7F0 116 aa10□□□□□ -0.81
HIF3A-204ENST00000300862 PRAC2D3DTV9 90 aa10□□□□□ -0.81
HIF3A-204ENST00000300862 SMKR1H3BMG3 65 aa10□□□□□ -0.81
HIF3A-204ENST00000300862 ZNF207O43670 478 aaKnown RBP10□□□□□ -0.81
HIF3A-204ENST00000300862 FA2HQ7L5A8 372 aa10□□□□□ -0.81
HIF3A-204ENST00000300862 PEF1Q9UBV8 284 aaKnown RBP10□□□□□ -0.81
HIF3A-204ENST00000300862 C7orf71A4D174 169 aa10□□□□□ -0.81
HIF3A-204ENST00000300862 OOSP1A8MZH6 123 aa10□□□□□ -0.81
HIF3A-204ENST00000300862 SAP30O75446 220 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 S100A7P31151 101 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 CLEC19AQ6UXS0 136 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 FGF6P10767 208 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 UQCRFS1P47985 274 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 NHLH1Q02575 133 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 TMEM219Q86XT9 240 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 ZNF747Q9BV97 191 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 MSRB1Q9NZV6 116 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 LINC00527Q9UJ94 153 aa9.99□□□□□ -0.81
HIF3A-204ENST00000300862 PPIFP30405 207 aaKnown RBP9.98□□□□□ -0.81
HIF3A-204ENST00000300862 TWIST1Q15672 202 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 Q6AWC8 147 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 ZNF502Q8TBZ5 544 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 JMJD8Q96S16 334 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 C19orf84I3L1E1 186 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 ORM1P02763 201 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 UBE2E1P51965 193 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 FAM104BQ5XKR9 115 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 ZNF575Q86XF7 245 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 PRELID3AQ96N28 172 aa9.98□□□□□ -0.81
HIF3A-204ENST00000300862 K7ERU9 68 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 TCTAP57738 103 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 LMO4P61968 165 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 UFSP1Q6NVU6 142 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 GATD1Q8NB37 220 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 OR8A1Q8NGG7 326 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 FAM110DQ8TAY7 271 aaPredicted RBP9.97□□□□□ -0.81
HIF3A-204ENST00000300862 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 MEGF9Q9H1U4 602 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 SELENOKQ9Y6D0 94 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 A0A096LNJ9 63 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 A0A1B0GW15 77 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 EFNA4P52798 201 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 MRPL51Q4U2R6 128 aaKnown RBP9.97□□□□□ -0.81
HIF3A-204ENST00000300862 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 ZFAND3Q9H8U3 227 aa9.97□□□□□ -0.81
HIF3A-204ENST00000300862 BUB3O43684 328 aa9.96□□□□□ -0.81
HIF3A-204ENST00000300862 SEC11AP67812 179 aa9.96□□□□□ -0.81
HIF3A-204ENST00000300862 ABCA2Q9BZC7 2435 aa9.96□□□□□ -0.81
HIF3A-204ENST00000300862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.96□□□□□ -0.82
HIF3A-204ENST00000300862 SCGB2A1O75556 95 aa9.96□□□□□ -0.82
HIF3A-204ENST00000300862 GAS8-AS1O95177 125 aa9.96□□□□□ -0.82
HIF3A-204ENST00000300862 ORMDL3Q8N138 153 aa9.96□□□□□ -0.82
HIF3A-204ENST00000300862 OR10AG1Q8NH19 301 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms