RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 H3BMM0 161 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 ARTNQ5T4W7 220 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 UBE2WQ96B02 151 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 HLA-DRB4X5D2U9 266 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 IGHV1OR15-1A0A075B7D0 117 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 ZNF134P52741 427 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 ZC2HC1AQ96GY0 325 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 CEP290O15078 2479 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 VWA8A3KMH1 1905 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 FAM104BQ5XKR9 115 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 PROK2Q9HC23 129 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 K7ENP7 123 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 NDUFS8O00217 210 aa10.82□□□□□ -0.68
CHRFAM7A-201ENST00000299847 DEFB136Q30KP8 78 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 Q8N8P6 123 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 SCRT2Q9NQ03 307 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 COX11Q9Y6N1 276 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 AHCTF1Q8WYP5 2266 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 SDHAF1A6NFY7 115 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 MAJINQ3KP22 176 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 DEFB105AQ8NG35 78 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 DNAJC30Q96LL9 226 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 TCF20Q9UGU0 1960 aaKnown RBP10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 LOXP28300 417 aaPredicted RBP10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 CACNA1DQ01668 2161 aa10.81□□□□□ -0.68
CHRFAM7A-201ENST00000299847 IGHV4-4A0A075B6R2 117 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 TINCRA0A1B0GVN0 87 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 Q6ZQT7 251 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 TRIOBPQ9H2D6 2365 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 PRSS29PA6NIE9 313 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 RBMY1FQ15415 496 aaKnown RBP10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 Q6ZS49 121 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 RSPO3Q9BXY4 272 aaPredicted RBP10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 FAM186AA6NE01 2351 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 HAMPP81172 84 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 WT1-ASQ06250 92 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 TMEM243Q9BU79 118 aa10.8□□□□□ -0.68
CHRFAM7A-201ENST00000299847 LY6G6EA0A0G2JKS1 128 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 H3BRN7 92 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 GNRH2O43555 120 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 CD5LO43866 347 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 PDE6HQ13956 83 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 Q6ZWC4 215 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 U3KQA8 63 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 NDUFS7O75251 213 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 NPYP01303 97 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 OVOL2Q9BRP0 275 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 ANGP03950 147 aaKnown RBP10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 GRNP28799 593 aaKnown RBP10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 MYLKQ15746 1914 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 SPRNQ5BIV9 151 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 SIGLEC8Q9NYZ4 499 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 V9GYV3 84 aa10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 HEATR1Q9H583 2144 aaKnown RBP10.79□□□□□ -0.68
CHRFAM7A-201ENST00000299847 IGLV3-9A0A075B6K5 115 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 SOCS3O14543 225 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 FGF6P10767 208 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 CDKN1BP46527 198 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 VWC2Q2TAL6 325 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 ZNF492Q9P255 531 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 ZSWIM8A7E2V4 1837 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 TMEM141Q96I45 108 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 NOP10Q9NPE3 64 aaKnown RBP10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 CRLF1O75462 422 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 MYO7BQ6PIF6 2116 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 IGKV2-29A2NJV5 120 aaPredicted RBP10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 PRR25Q96S07 402 aa10.78□□□□□ -0.68
CHRFAM7A-201ENST00000299847 FNDC10F2Z333 226 aa10.77□□□□□ -0.68
CHRFAM7A-201ENST00000299847 XCL1P47992 114 aa10.77□□□□□ -0.68
CHRFAM7A-201ENST00000299847 YPEL3P61236 119 aaPredicted RBP10.77□□□□□ -0.68
CHRFAM7A-201ENST00000299847 SRSF8Q9BRL6 282 aaKnown RBP10.77□□□□□ -0.68
CHRFAM7A-201ENST00000299847 IGKV1OR2-108A0A075B7D4 117 aa10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 MRPL35Q9NZE8 188 aaKnown RBP10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 KLF5Q13887 457 aaPredicted RBP10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 TSSC4Q9Y5U2 329 aaPredicted RBP10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 Q0VG73 95 aa10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 APRG1Q8IVJ8 170 aa10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 Q9HAA7 133 aa10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 HELZP42694 1942 aaKnown RBP10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 FNDC1Q4ZHG4 1894 aaPredicted RBP10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 FOXE3Q13461 319 aa10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 DKK2Q9UBU2 259 aa10.77□□□□□ -0.69
CHRFAM7A-201ENST00000299847 THSD7BQ9C0I4 1608 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 WDR81Q562E7 1941 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 SMIM27A0A1W2PRY6 76 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 KLF2Q9Y5W3 355 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 A8MWP6 167 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 PI4KAP42356 2102 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 NDUFA12Q9UI09 145 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 Q8TCH9 128 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 LHBP01229 141 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 PRB2P02812 416 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 HOXB4P17483 251 aaPredicted RBP10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 PLXNA3P51805 1871 aa10.76□□□□□ -0.69
CHRFAM7A-201ENST00000299847 SIP14410 1827 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms