RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 LTBRP36941 435 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 NBR2O15453 112 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 C1QL2Q7Z5L3 287 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 DPM3Q9P2X0 92 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 IGHV1-45A0A0A0MS14 117 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 IGHV4-28A0A0C4DH34 117 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 NMSQ5H8A3 153 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 NTN5Q8WTR8 489 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 ZFP2Q6ZN57 461 aa9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 ANKHD1Q8IWZ3 2542 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-201ENST00000299633 SIVA1O15304 175 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 Q0VG73 95 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 FN1P02751 2386 aaKnown RBP9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 IGLV1-36A0A0B4J1U3 117 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 PMS2P5A8MQ11 134 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 PDE6HQ13956 83 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 FHL5Q5TD97 284 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 AMTNQ6UX39 209 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 LYPD6BQ8NI32 183 aa9.16□□□□□ -0.94
HDGFL3-201ENST00000299633 TRAV3A0A0B4J244 114 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 SRXN1Q9BYN0 137 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 TRBV19A0A075B6N1 114 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 SLC25A47Q6Q0C1 308 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 TRGV9Q99603 122 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 TMEM14DPA8MWL7 114 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 IGHV1OR15-1A0A075B7D0 117 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 C12orf74Q32Q52 190 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 C3orf56Q8N813 242 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 SAA2-SAA4A0A096LPE2 208 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 FAM236DA0A1B0GTK5 79 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 SAA2P0DJI9 122 aaPredicted RBP9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 FAM236CP0DP71 79 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 TP53TG1Q9Y2A0 90 aa9.15□□□□□ -0.94
HDGFL3-201ENST00000299633 PATE3B3GLJ2 98 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 IGKV4-1P06312 121 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 CGB7P0DN87 165 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 IGHV2-26A0A0B4J1V2 119 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 TIMM23O14925 209 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 CRYBA2P53672 197 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 ZNF329Q86UD4 541 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 SMRP1Q8NCR6 262 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 LIME1Q9H400 295 aa9.15□□□□□ -0.95
HDGFL3-201ENST00000299633 TEX48A0A1B0GUV7 120 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 CRYGBP07316 175 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 NDUFV3P56181 108 aaKnown RBP9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 LTBP4Q8N2S1 1624 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 RPL15P61313 204 aaKnown RBP9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 NPYP01303 97 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 IGHV3-11P01762 117 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 IL9P15248 144 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 PRCDQ00LT1 54 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 EFEMP2O95967 443 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 CGB3P0DN86 165 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 I3L3M4 83 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 PRR33A8MZF0 331 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 G3V4G9 280 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 CRYGCP07315 174 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 F8VRH5 84 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 FBLN5Q9UBX5 448 aa9.14□□□□□ -0.95
HDGFL3-201ENST00000299633 NREPQ16612 68 aa9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 Q6ZVH6 145 aa9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 TRBV7-1A0A0A6YYK4 115 aa9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 CASC2Q6XLA1 102 aa9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 CLPSP04118 112 aa9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 COLCA1Q6ZS62 124 aa9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 DKK2Q9UBU2 259 aa9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 RPL35AP18077 110 aaKnown RBP9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 LINC00477Q96M19 166 aa9.13□□□□□ -0.95
HDGFL3-201ENST00000299633 UBE2E1P51965 193 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 LINC01620Q4KN68 170 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 ZNF493Q6ZR52 646 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 C15orf32Q32M92 178 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 UNQ6494/PRO21346Q6UXR6 183 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 C9JQL5 133 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 CYTL1Q9NRR1 136 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 CSRP3P50461 194 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 ZNF501Q96CX3 271 aaPredicted RBP9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 SPATA31B1PQ5VZV4 182 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 COX6A1P12074 109 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 ICOSQ9Y6W8 199 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 GFI1Q99684 422 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 HERVK_113P63121 156 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 RNF152Q8N8N0 203 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 UPK3BQ9BT76 320 aa9.12□□□□□ -0.95
HDGFL3-201ENST00000299633 C3orf36Q3SXR2 165 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 C5orf67F2Z3F1 127 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 ETV2O00321 342 aaPredicted RBP9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 C1orf53Q5VUE5 145 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 IGHV2-70DA0A0C4DH43 119 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 MESP1Q9BRJ9 268 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 Q6ZUT4 128 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 HS3ST6Q96QI5 342 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 NRN1LQ496H8 165 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 IL17RELQ6ZVW7 336 aa9.11□□□□□ -0.95
HDGFL3-201ENST00000299633 Q8NFD4 153 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms