RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 F6UB75 175 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 EVI2AP22794 236 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 PAX8Q06710 450 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 TMEM78Q5T7P6 136 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 MOB4Q9Y3A3 225 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 CHD6Q8TD26 2715 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 LEPROTL1O95214 131 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 LTAP01374 205 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 EGR2P11161 476 aaPredicted RBP7.23□□□□□ -1.25
PRDM9-201ENST00000296682 CKS2P33552 79 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 PSG9Q00887 426 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 HIST1H1AQ02539 215 aaPredicted RBP7.23□□□□□ -1.25
PRDM9-201ENST00000296682 LINC00173Q6ZV60 143 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 SVIPQ8NHG7 77 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 BEX4Q9NWD9 120 aaPredicted RBP7.23□□□□□ -1.25
PRDM9-201ENST00000296682 MSRB1Q9NZV6 116 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 AVPP01185 164 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 IGHV4-59P01825 116 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 TRBV6-1A0A0K0K1D8 114 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 OOSP1A8MZH6 123 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 COX19Q49B96 90 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 C10orf99Q6UWK7 81 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 C1orf122Q6ZSJ8 110 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 OVOL3O00110 214 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 IGLC2P0DOY2 106 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 LINC00310P59036 64 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 TM4SF20Q53R12 229 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 FAM162BQ5T6X4 162 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 UNQ9165/PRO28630Q6UXU0 137 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 Q6ZQT7 251 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 ERASQ7Z444 233 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 BBC3Q96PG8 261 aaPredicted RBP7.22□□□□□ -1.25
PRDM9-201ENST00000296682 ALKBH7Q9BT30 221 aaPredicted RBP7.22□□□□□ -1.25
PRDM9-201ENST00000296682 KLF12Q9Y4X4 402 aa7.22□□□□□ -1.25
PRDM9-201ENST00000296682 M0R381 172 aa7.21□□□□□ -1.25
PRDM9-201ENST00000296682 C16orf54Q6UWD8 224 aa7.21□□□□□ -1.25
PRDM9-201ENST00000296682 OR4B1Q8NGF8 309 aa7.21□□□□□ -1.25
PRDM9-201ENST00000296682 FAM110DQ8TAY7 271 aaPredicted RBP7.21□□□□□ -1.25
PRDM9-201ENST00000296682 MBD6Q96DN6 1003 aa7.21□□□□□ -1.25
PRDM9-201ENST00000296682 ZFP30Q9Y2G7 519 aa7.21□□□□□ -1.25
PRDM9-201ENST00000296682 D6R8Y8 96 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 OR5AL1P0C617 328 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 C21orf62-AS1Q17RA5 79 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 SPANXN1Q5VSR9 72 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 FAM231DQ6ZW35 169 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 REC114Q7Z4M0 266 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 OR4X2Q8NGF9 303 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 C10orf105Q8TEF2 133 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 TP73-AS1Q9UF72 201 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 HELZ2Q9BYK8 2649 aaKnown RBP7.21□□□□□ -1.26
PRDM9-201ENST00000296682 A8MWP6 167 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 F8W735 103 aaPredicted RBP7.21□□□□□ -1.26
PRDM9-201ENST00000296682 EREGO14944 169 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 LINC00614P0C842 121 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 CRIP1P50238 77 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 C5orf56Q8N8D9 126 aa7.21□□□□□ -1.26
PRDM9-201ENST00000296682 WIPF2Q8TF74 440 aaPredicted RBP7.21□□□□□ -1.26
PRDM9-201ENST00000296682 B4DSR2 109 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 HSBP1L1C9JCN9 74 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 HINT1P49773 126 aaPredicted RBP7.2□□□□□ -1.26
PRDM9-201ENST00000296682 ZNF80P51504 273 aaPredicted RBP7.2□□□□□ -1.26
PRDM9-201ENST00000296682 HNRNPA3P51991 378 aaKnown RBP7.2□□□□□ -1.26
PRDM9-201ENST00000296682 FER1L6-AS1Q8NA97 138 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 CCDC140Q96MF4 163 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 ZNF48Q96MX3 618 aaPredicted RBP7.2□□□□□ -1.26
PRDM9-201ENST00000296682 PRR25Q96S07 402 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 WI2-2373I1.2A0A1W2PRP0 233 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 KRTAP10-9P60411 292 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 DEFB112Q30KQ8 113 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 SAPCD1Q5SSQ6 148 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 ZNF502Q8TBZ5 544 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 DUX3Q96PT4 197 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 MLST8Q9BVC4 326 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 TMEM14CQ9P0S9 112 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 FLNBO75369 2602 aaKnown RBP7.2□□□□□ -1.26
PRDM9-201ENST00000296682 FLNAP21333 2647 aaKnown RBP7.2□□□□□ -1.26
PRDM9-201ENST00000296682 hDV102S1A0JD36 115 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 Q0VG73 95 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 RASL11AQ6T310 242 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 AP5S1Q9NUS5 200 aa7.2□□□□□ -1.26
PRDM9-201ENST00000296682 IGLV2-11P01706 119 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 S100A7P31151 101 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 IFI27P40305 119 aaPredicted RBP7.19□□□□□ -1.26
PRDM9-201ENST00000296682 OR10J3Q5JRS4 329 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 PRELID3AQ96N28 172 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 SMAD5-AS1Q9Y6J3 95 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 FABP5P3A8MUU1 101 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 M0R143 59 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 IGF1P05019 195 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 RNASE4P34096 147 aaKnown RBP7.19□□□□□ -1.26
PRDM9-201ENST00000296682 BMI1P35226 326 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 PSMG3-AS1Q96PY0 264 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 CBY1Q9Y3M2 126 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 ITPR3Q14573 2671 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 BUB3O43684 328 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 MGPP08493 103 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 GATA1P15976 413 aaPredicted RBP7.19□□□□□ -1.26
PRDM9-201ENST00000296682 C8orf86Q6ZUL3 223 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 SMIM15Q7Z3B0 74 aa7.19□□□□□ -1.26
PRDM9-201ENST00000296682 NDUFAF3Q9BU61 184 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms