RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 C12orf74Q32Q52 190 aa8.83□□□□□ -1
PBRM1-201ENST00000296302 DAZ1Q9NQZ3 744 aaKnown RBP8.83□□□□□ -1
PBRM1-201ENST00000296302 PLA2G2EQ9NZK7 142 aa8.83□□□□□ -1
PBRM1-201ENST00000296302 ZNRD1Q9P1U0 126 aa8.83□□□□□ -1
PBRM1-201ENST00000296302 C6orf226Q5I0X4 101 aa8.83□□□□□ -1
PBRM1-201ENST00000296302 VWC2LB2RUY7 222 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 HLA-DMBP28068 263 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 C3orf36Q3SXR2 165 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 Q6ZR03 302 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 TRGV1A0A0A0MS02 117 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 HTN3P15516 51 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 C1QTNF4Q9BXJ3 329 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 K7ERJ3 54 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 UNQ6494/PRO21346Q6UXR6 183 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
PBRM1-201ENST00000296302 PROK2Q9HC23 129 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 PLXNA4Q9HCM2 1894 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 A0A087WX48 190 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 TRAV13-1A0A0B4J241 112 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 SOCS3O14543 225 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 HEATR5AQ86XA9 2040 aa8.82□□□□□ -1
PBRM1-201ENST00000296302 RHODO00212 210 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 C20orf78Q9BR46 151 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 RLFQ13129 1914 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 A0A1W2PRX2 142 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 I3L3M4 83 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 DKK2Q9UBU2 259 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 SDHAF1A6NFY7 115 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 INSP01308 110 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 CEACAM8P31997 349 aaPredicted RBP8.81□□□□□ -1
PBRM1-201ENST00000296302 Q6ZVH6 145 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 TCF20Q9UGU0 1960 aaKnown RBP8.81□□□□□ -1
PBRM1-201ENST00000296302 WNK2Q9Y3S1 2297 aa8.81□□□□□ -1
PBRM1-201ENST00000296302 NUPR1O60356 82 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 IGLC1P0CG04 106 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 A0A0G2JNJ9 132 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 GAGE12JA6NER3 117 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 GAGE7O76087 117 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 GAGE12FP0CL80 117 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 GAGE12GP0CL81 117 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 GAGE12IP0CL82 117 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 ZNF134P52741 427 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 GAGE4Q13068 117 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 AMTNQ6UX39 209 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 LYPD6Q86Y78 171 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 Q9UFV3 132 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 SCN5AQ14524 2016 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 SSC4DQ8WTU2 575 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 ZNF625Q96I27 306 aaPredicted RBP8.8□□□□□ -1
PBRM1-201ENST00000296302 SPANXCQ9NY87 97 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 H3BUX3 64 aa8.8□□□□□ -1
PBRM1-201ENST00000296302 K7EMI3 77 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 COL8A2P25067 703 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 ROS1P08922 2347 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 J3QQQ9 107 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 NDUFA12Q9UI09 145 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 ABCA1O95477 2261 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 TRAV26-2A0A0B4J265 109 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 DSCR9P59020 149 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 TEX36Q5VZQ5 186 aa8.79□□□□□ -1
PBRM1-201ENST00000296302 HEATR1Q9H583 2144 aaKnown RBP8.79□□□□□ -1
PBRM1-201ENST00000296302 INTS1Q8N201 2190 aaKnown RBP8.79□□□□□ -1
PBRM1-201ENST00000296302 ZNF503-AS2A6NEH8 195 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 SHISA9B4DS77 424 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 OVOL3O00110 214 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 MORN5Q5VZ52 161 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 C8orf86Q6ZUL3 223 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 TRIOBPQ9H2D6 2365 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 FER1L5A0AVI2 2057 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 TDRG1Q3Y452 100 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 LINC01545Q5VT33 79 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 Q6ZSR3 168 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 DKK1O94907 266 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 FAM120AOSQ5T036 256 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 Q6ZS92 163 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
PBRM1-201ENST00000296302 RNASE8Q8TDE3 154 aaKnown RBP8.78□□□□□ -1
PBRM1-201ENST00000296302 SAA4P35542 130 aa8.77□□□□□ -1
PBRM1-201ENST00000296302 PCP2Q8IVA1 136 aa8.77□□□□□ -1
PBRM1-201ENST00000296302 ATP6V0E1O15342 81 aa8.77□□□□□ -1.01
PBRM1-201ENST00000296302 LOXP28300 417 aaPredicted RBP8.77□□□□□ -1.01
PBRM1-201ENST00000296302 GAGE5Q13069 117 aa8.77□□□□□ -1.01
PBRM1-201ENST00000296302 GAGE6Q13070 117 aa8.77□□□□□ -1.01
PBRM1-201ENST00000296302 CARD19Q96LW7 228 aa8.77□□□□□ -1.01
PBRM1-201ENST00000296302 SCRT2Q9NQ03 307 aa8.77□□□□□ -1.01
PBRM1-201ENST00000296302 SRSF2Q01130 221 aaKnown RBP8.77□□□□□ -1.01
PBRM1-201ENST00000296302 ANXA2RQ3ZCQ2 193 aa8.77□□□□□ -1.01
PBRM1-201ENST00000296302 TEX48A0A1B0GUV7 120 aa8.77□□□□□ -1.01
PBRM1-201ENST00000296302 SS18Q15532 418 aa8.77□□□□□ -1.01
PBRM1-201ENST00000296302 E7EQL1 145 aa8.76□□□□□ -1.01
PBRM1-201ENST00000296302 IGHV3-53P01767 116 aa8.76□□□□□ -1.01
PBRM1-201ENST00000296302 CNOT1A5YKK6 2376 aaKnown RBP8.76□□□□□ -1.01
PBRM1-201ENST00000296302 IGLV1-44P01699 117 aa8.76□□□□□ -1.01
PBRM1-201ENST00000296302 IGHG4P01861 327 aa8.76□□□□□ -1.01
PBRM1-201ENST00000296302 ASPHD1Q5U4P2 390 aa8.76□□□□□ -1.01
PBRM1-201ENST00000296302 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
PBRM1-201ENST00000296302 CITED1Q99966 193 aa8.76□□□□□ -1.01
PBRM1-201ENST00000296302 TPSG1Q9NRR2 321 aa8.76□□□□□ -1.01
PBRM1-201ENST00000296302 POLEQ07864 2286 aa8.76□□□□□ -1.01
PBRM1-201ENST00000296302 UBE2E1P51965 193 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms