RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 TMEM189A5PLL7 270 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 M0QZK8 103 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 M0R143 59 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 PF4V1P10720 104 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 LCNL1Q6ZST4 164 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 LINC01356Q8N9X3 169 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
NXF1-201ENST00000294172 HSBP1O75506 76 aa10.77□□□□□ -0.69
NXF1-201ENST00000294172 C20orf144Q9BQM9 153 aa10.77□□□□□ -0.69
NXF1-201ENST00000294172 M0QZ24 198 aa10.76□□□□□ -0.69
NXF1-201ENST00000294172 TGFAP01135 160 aa10.76□□□□□ -0.69
NXF1-201ENST00000294172 GATA3P23771 443 aa10.76□□□□□ -0.69
NXF1-201ENST00000294172 PPIFP30405 207 aaKnown RBP10.76□□□□□ -0.69
NXF1-201ENST00000294172 RIGQ13278 110 aa10.76□□□□□ -0.69
NXF1-201ENST00000294172 MIEN1Q9BRT3 115 aa10.76□□□□□ -0.69
NXF1-201ENST00000294172 ZNF80P51504 273 aaPredicted RBP10.76□□□□□ -0.69
NXF1-201ENST00000294172 NIT1Q86X76 327 aa10.76□□□□□ -0.69
NXF1-201ENST00000294172 Q8N976 141 aa10.76□□□□□ -0.69
NXF1-201ENST00000294172 BORCS7Q96B45 105 aa10.76□□□□□ -0.69
NXF1-201ENST00000294172 LOC102724200A0A096LPH7 203 aaPredicted RBP10.75□□□□□ -0.69
NXF1-201ENST00000294172 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.75□□□□□ -0.69
NXF1-201ENST00000294172 MUC21A0A0G2JKD1 596 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 MUC21A0A140T8X8 626 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 FBLL1A6NHQ2 334 aaKnown RBP10.75□□□□□ -0.69
NXF1-201ENST00000294172 MUC21Q5SSG8 566 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 C8orf86Q6ZUL3 223 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 SLC50A1Q9BRV3 221 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 NDFIP1Q9BT67 221 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 M0R2Z0 102 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 C3orf79P0CE67 100 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 RAB4AP20338 218 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 NUTF2P61970 127 aaKnown RBP10.75□□□□□ -0.69
NXF1-201ENST00000294172 DEFB112Q30KQ8 113 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 LYZL1Q6UWQ5 148 aa10.75□□□□□ -0.69
NXF1-201ENST00000294172 IGHV4-59P01825 116 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 KRTAP10-9P60411 292 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 Q6AWC8 147 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 ATP6V0BQ99437 205 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 U3KQE9 123 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 RNF223E7ERA6 249 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 BMI1P35226 326 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 TMEM95Q3KNT9 176 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 COX8CQ7Z4L0 72 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 OR4X2Q8NGF9 303 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 USMG5Q96IX5 58 aa10.74□□□□□ -0.69
NXF1-201ENST00000294172 A0A096LNT2 108 aa10.73□□□□□ -0.69
NXF1-201ENST00000294172 ORM1P02763 201 aa10.73□□□□□ -0.69
NXF1-201ENST00000294172 PMCHL1Q16048 86 aa10.73□□□□□ -0.69
NXF1-201ENST00000294172 IL17RELQ6ZVW7 336 aa10.73□□□□□ -0.69
NXF1-201ENST00000294172 URB1-AS1Q96HZ7 61 aa10.73□□□□□ -0.69
NXF1-201ENST00000294172 C16orf92Q96LL3 132 aa10.73□□□□□ -0.69
NXF1-201ENST00000294172 CREBBPQ92793 2442 aa10.73□□□□□ -0.69
NXF1-201ENST00000294172 H3BUA1 57 aa10.73□□□□□ -0.69
NXF1-201ENST00000294172 A6NJY4 79 aa10.72□□□□□ -0.69
NXF1-201ENST00000294172 NDUFA4O00483 81 aa10.72□□□□□ -0.69
NXF1-201ENST00000294172 SMAD7O15105 426 aaKnown RBP10.72□□□□□ -0.69
NXF1-201ENST00000294172 TCAPO15273 167 aa10.72□□□□□ -0.69
NXF1-201ENST00000294172 SPATA45Q537H7 98 aa10.72□□□□□ -0.69
NXF1-201ENST00000294172 A0A1B0GW15 77 aa10.72□□□□□ -0.69
NXF1-201ENST00000294172 TMEM213A2RRL7 107 aa10.72□□□□□ -0.69
NXF1-201ENST00000294172 ZNF138P52744 262 aa10.72□□□□□ -0.69
NXF1-201ENST00000294172 AGPAT4-IT1Q9H0P7 198 aa10.72□□□□□ -0.69
NXF1-201ENST00000294172 RBAKDNA6NC62 111 aa10.71□□□□□ -0.69
NXF1-201ENST00000294172 FAM181BA6NEQ2 426 aa10.71□□□□□ -0.69
NXF1-201ENST00000294172 FABP5P3A8MUU1 101 aa10.71□□□□□ -0.69
NXF1-201ENST00000294172 CSN3P07498 182 aa10.71□□□□□ -0.69
NXF1-201ENST00000294172 GLMPQ8WWB7 406 aa10.71□□□□□ -0.69
NXF1-201ENST00000294172 MXRA5Q9NR99 2828 aa10.71□□□□□ -0.7
NXF1-201ENST00000294172 IGLV1-40P01703 118 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 RPL11P62913 178 aaKnown RBP10.7□□□□□ -0.7
NXF1-201ENST00000294172 TMEM78Q5T7P6 136 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 ATOH7Q8N100 152 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 FER1L6-AS1Q8NA97 138 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 SELENOKQ9Y6D0 94 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 A0A0G2JLM5 398 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 J3QLI3 93 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 BRI3O95415 125 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 RPS20P60866 119 aaKnown RBP10.7□□□□□ -0.7
NXF1-201ENST00000294172 NPFFR1Q9GZQ6 430 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 DOPEY2Q9Y3R5 2298 aa10.7□□□□□ -0.7
NXF1-201ENST00000294172 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 LINC00614P0C842 121 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 CTRLP40313 264 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 TWIST1Q15672 202 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 BATFQ16520 125 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 CLEC5AQ9NY25 188 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 TEX15Q9BXT5 2789 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 EBLN2Q6P2I7 272 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 ZNF738Q8NE65 137 aa10.69□□□□□ -0.7
NXF1-201ENST00000294172 CHCHD1Q96BP2 118 aaKnown RBP10.69□□□□□ -0.7
NXF1-201ENST00000294172 IGHV1-24A0A0C4DH33 117 aa10.68□□□□□ -0.7
NXF1-201ENST00000294172 CFHR3Q02985 330 aa10.68□□□□□ -0.7
NXF1-201ENST00000294172 TM4SF20Q53R12 229 aa10.68□□□□□ -0.7
NXF1-201ENST00000294172 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
NXF1-201ENST00000294172 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
NXF1-201ENST00000294172 GATD1Q8NB37 220 aa10.68□□□□□ -0.7
NXF1-201ENST00000294172 LOXL1Q08397 574 aaPredicted RBP10.68□□□□□ -0.7
NXF1-201ENST00000294172 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms